SM3420 Chemically modified siRNA information

Field Sense Antisense
siRNA chemical modification 2-O-Methyl* Phosphodiester 2-O-Methyl* Phosphodiester
siRNA modification types 2 2
Overall number of modifications 18 13
Position of modifications 2,4,6,8,10,12,14,16,18 * 2,4,6,8,10,12,14,16,18 6,7,10,11,17,18,19 * 6,7,10,11,17,18
Modification on sugar or base or phosphate Sugar Sugar
SMILES
(Click to view structure & nomenclature)
COC1C(O)OC(CO)C1O
OP(O)(O)=O


COC1C(O)OC(CO)C1O
OCC1OCC(O)C1OP(O)([O-])=O


siRNA Sequence GGAGAUCAACAUUUUCAAA UUUGAAAAUGUUGAUCUCC
siRNA length base-pair 19 19
siRNA name in paper 11 10
Biological activity IC-50 = 117.59 nM for target mRNA
Experiment used to check activity Real-time PCR
Melting temperature (oC) NA
Target gene Survivin gene
siRNA concentration 200 nM
Cell or Organism used U-87 MG cells
Transfection method Lipofectin (Invitrogen)
Duration after transfection 16 Hours
Article title POSITIONALLY MODIFIED siRNA CONSTRUCTS
Reference US8394947, EP1765074B1