SM3422 Chemically modified siRNA information

Field Sense Antisense
siRNA chemical modification 2-O-Methyl* Phosphodiester 2-O-Methyl* Phosphodiester
siRNA modification types 2 2
Overall number of modifications 36 13
Position of modifications 2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19 * 2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19 6,7,10,11,18,19,20 * 6,7,10,11,18,19
Modification on sugar or base or phosphate Sugar Sugar
SMILES
(Click to view structure & nomenclature)
COC1C(O)OC(CO)C1O
OP(O)(O)=O


COC1C(O)OC(CO)C1O
OCC1OCC(O)C1OP(O)([O-])=O


siRNA Sequence AGAAGACACCUUCUGAGUAU AUACUCAGAAGGUGUCUUCU
siRNA length base-pair 20 20
siRNA name in paper 9 8
Biological activity IC-50 = 261 nM for target mRNA
Experiment used to check activity Real-time PCR
Melting temperature (oC) NA
Target gene eIF4E gene
siRNA concentration 200 nM
Cell or Organism used MH-S cells
Transfection method Lipofectin (Invitrogen)
Duration after transfection 16 Hours
Article title POSITIONALLY MODIFIED siRNA CONSTRUCTS
Reference US8394947, EP1765074B1