SM5320 Chemically modified siRNA information

Field Sense Antisense
siRNA chemical modification Inverted abasic* 2-Methoxy 5-hydroxy ribose* 2-Methoxy
siRNA modification types 2 2
Overall number of modifications 4 3
Position of modifications 1,21 * 20,21 1 * 20,21
Modification on sugar or base or phosphate Base; Sugar Sugar
SMILES
(Click to view structure & nomenclature)
CC1COC(CO)C1OP(O)([O-])=O
COC1C(O)OC(CO)C1O


C1COC(C1O)CO
COC1C(O)OC(CO)C1O


siRNA Sequence CAUUGAACCCAAAUUUGAUUU AUCAAAUUUGGGUUCAAUGUU
siRNA length base-pair 21 21
siRNA name in paper PHD2(196) unmodified siRNA PHD2(196) unmodified siRNA
Biological activity EC-50 = 0.05 nM for target mRNA
Experiment used to check activity Real-time quantitative PCR
Melting temperature (oC) NA
Target gene PHD2 gene
siRNA concentration NA
Cell or Organism used Hepa1-6 cells
Transfection method Lipofectamine RNAiMax
Duration after transfection 24 Hours
Article title In vivo activity and duration of short interfering RNAs containing a synthetic 5'-phosphate
Reference22400991