VIRsiRNAdb

Browse BY

• Family of Virus


• Virus Name


• Gene Name


• Pubmed Id


• VsiRNAid

Total number of Results for Hepatitis Delta Virus [HDV] are 16
Results from 0 - 25

siRNA sequence "ucuaccuccaucugguccg" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "ucuaccuccaucugguccg" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2048 " record
Length: 19
GC Content:58 %
Starting position: 1354
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ucuaccuccaucugguccg" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "aguuccucuaacuucuuuc" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "aguuccucuaacuucuuuc" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2046 " record
Length: 19
GC Content:37 %
Starting position: 1510
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "aguuccucuaacuucuuuc" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "cucgacuuaucguccccau" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "cucgacuuaucguccccau" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2058 " record
Length: 19
GC Content:53 %
Starting position: 486
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "cucgacuuaucguccccau" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "uuguucucgagggccuucc" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "uuguucucgagggccuucc" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2049 " record
Length: 19
GC Content:58 %
Starting position: 1267
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uuguucucgagggccuucc" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "uuccuccuugcugagguuc" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "uuccuccuugcugagguuc" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2051 " record
Length: 19
GC Content:53 %
Starting position: 1221
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uuccuccuugcugagguuc" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "ucaaccuccugaguuccuc" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "ucaaccuccugaguuccuc" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2052 " record
Length: 19
GC Content:53 %
Starting position: 1199
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ucaaccuccugaguuccuc" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "uuaucccggggaacucga" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "uuaucccggggaacucga" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2061 " record
Length: 18
GC Content:56 %
Starting position: 475
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uuaucccggggaacucga" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "uucuuucccuucucucguc" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "uucuuucccuucucucguc" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2053 " record
Length: 19
GC Content:47 %
Starting position: 1272
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uucuuucccuucucucguc" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "uccuauggaaaucccuggu" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "uccuauggaaaucccuggu" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2054 " record
Length: 19
GC Content:47 %
Starting position: 1009
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uccuauggaaaucccuggu" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "agagcauuggaacgucgga" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "agagcauuggaacgucgga" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2055 " record
Length: 19
GC Content:53 %
Starting position: 67
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "agagcauuggaacgucgga" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "ggguugaguagcacucaga" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "ggguugaguagcacucaga" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2056 " record
Length: 19
GC Content:53 %
Starting position: 248
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggguugaguagcacucaga" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "gcgaggaggaaagcaaaga" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "gcgaggaggaaagcaaaga" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2057 " record
Length: 19
GC Content:53 %
Starting position: 399
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gcgaggaggaaagcaaaga" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "uucagcgaacaagaggcgc" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "uucagcgaacaagaggcgc" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2060 " record
Length: 19
GC Content:58 %
Starting position: 319
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "uucagcgaacaagaggcgc" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "gaugucacgguaaagagca" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "gaugucacgguaaagagca" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2059 " record
Length: 19
GC Content:47 %
Starting position: 56
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gaugucacgguaaagagca" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "cgauagcugcuucuucuug" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "cgauagcugcuucuucuug" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2050 " record
Length: 19
GC Content:47 %
Starting position: 1251
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "cgauagcugcuucuucuug" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586

siRNA sequence "gggauuuucguccucuauc" alignment with "Hepatitis Delta Virus [HDV]" virus reference Genome sequences
siRNA sequence matching with "gggauuuucguccucuauc" Hepatitis Delta Virus [HDV]" Virus reference Genome sequences
Browse all the records for "Hepatitis Delta Virus [HDV]" virus
Browse "virsi2047 " record
Length: 19
GC Content:47 %
Starting position: 1452
GenBank Acc: NC_001653
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gggauuuucguccucuauc" siRNA in Human Genome sequences
See NC_001653 at Genbank
Pubmed:12915586
Article:Susceptibility of human hepatitis delta virus RNAs to small interfering RNA action.
Authors:Chang J, Taylor JM.
Journal:J Virol. 2003 Sep;77(17):9728-31.
Entrez:12915586


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2048	ucuaccuccaucugguccg	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	60	12915586	Blast SL	refseqs
virsi2046	aguuccucuaacuucuuuc	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	8	12915586	Blast SL	refseqs
virsi2058	cucgacuuaucguccccau	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	30	12915586	Blast SL	refseqs
virsi2049	uuguucucgagggccuucc	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	90	12915586	Blast SL	refseqs
virsi2051	uuccuccuugcugagguuc	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	90	12915586	Blast SL	refseqs
virsi2052	ucaaccuccugaguuccuc	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	90	12915586	Blast SL	refseqs
virsi2061	uuaucccggggaacucga	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	90	12915586	Blast SL	refseqs
virsi2053	uucuuucccuucucucguc	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	65	12915586	Blast SL	refseqs
virsi2054	uccuauggaaaucccuggu	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	70	12915586	Blast SL	refseqs
virsi2055	agagcauuggaacgucgga	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	75	12915586	Blast SL	refseqs
virsi2056	ggguugaguagcacucaga	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	70	12915586	Blast SL	refseqs
virsi2057	gcgaggaggaaagcaaaga	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	78	12915586	Blast SL	refseqs
virsi2060	uucagcgaacaagaggcgc	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	80	12915586	Blast SL	refseqs
virsi2059	gaugucacgguaaagagca	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	65	12915586	Blast SL	refseqs
virsi2050	cgauagcugcuucuucuug	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	55	12915586	Blast SL	refseqs
virsi2047	gggauuuucguccucuauc	Hepatitis Delta Virus [HDV]	Delta Ag	Huh-7	Protein	0	12915586	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm