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Next   PreviousPage - 1 of 2 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) GC Content (%) Cell line PubMed 1643 HIV-1 (NL4-3) AF324493 Gag/pol 2987 GAAGCAGAGCUAGAACUGGC 81.00 44 293 FT cells 20949027 1453 HIV-1 (NL4-3) AF324493 Pol 921 AUGGAAAGGAUCACCAGCAA 81.00 36 HEK 293a 19497094 1638 HIV-1 (NL4-3) AF324493 Gag/pol 1873 UACAGGAGCAGAUGAUACAG 81.00 36 293 FT cells 20949027 1654 HIV-1 (NL4-3) AF324493 VIF 4698 UGGUUUUAUAGACAUCACUA 81.00 24 293 FT cells 20949027 1485 HIV-1 (NL4-3) AF324493 Vif 9 AAGAAGCGGAGACAGCGACG 81.10 48 HEK 293a 19497094 1473 HIV-1 (NL4-3) AF324493 Vif 9 CAGAUGGCAGGUGAUGAUUGU 81.10 38 HEK 293a 19497094 1519 HIV-1 (LAI) K02013 Pol 4545 GUGAAGGGGCAGUAGUAAU 82.00 38 293 T 19656954 1397 HIV-1 (NL4-3) AF324493 Rev 5982 GCGGAGACAGCGACGAAGAGC 82.00 54 293 T 19110017 1092 HIV-1 (R3b) K02013 Tat/Rev N/A GCGGAGACAGCGACGAAGAGC 82.00 54 CEMx174 15851006 1631 HIV-1 (NL4-3) AF324493 Gag/pol 1668 CCACCAGAAGAGAGCUUCAG 82.00 44 293 FT cells 20949027 1581 HIV-1(P89) K02013 vif K*5195 GUUCAGAAGUACACAUCCC 82.00 38 Hela 15831707 1646 HIV-1 (NL4-3) AF324493 Gag/pol 3322 GAGUGGGAGUUUGUCAAUAC 82.00 36 293 FT cells 20949027 1163 HIV-1 (LAI) K02013 Pol 4393 CAGUGCAGGGGAAAGAAUA 82.00 38 293 T 16959541 1639 HIV-1 (NL4-3) AF324493 Gag/pol 2816 GUACAGCCUAUAGUGCUGCC 82.00 44 293 FT cells 20949027 1312 93IN101 AB023804 LTR 515 UGCUUAAGCCUCAAUAAAGCU 82.40 31 Hela 17996047 1383 HIV-1 (NL4-3) AF324493 LTR 254 GAAGCGCGCACGGCAAGAGG 83.00 56 Hela 18208841 1651 HIV-1 (NL4-3) AF324493 Gag/pol 4384 GGACAAGUAGACUGUAGCCC 83.00 44 293 FT cells 20949027 1382 HIV-1 (NL4-3) AF324493 LTR 251 GCUGAAGCGCGCACGGCAAG 83.00 56 Hela 18208841 1250 HIV-1 (NL4-3) AF324493 Pol 2486 ACCUACACCUGUCAACAUAAU 83.00 31 Hela 17996047 1410 HIV-1 (LAI) K02013 Gag 1623 CAGGCUAAUUUUUUAGGGA 83.00 29 293 T 19384894 1116 HIV-1 (LAI) K02013 Nef 8553 GUGCCUGGCUAGAAGCACA 83.00 46 293 T 16948865 1124 HIV-1 (LAI) K02013 Gag 332 AGAGAUGGGUGCGAGAGCG 83.00 50 293 T 16959541 1114 HIV-1 (LAI) K02013 LTR 798 AGAUGGGUGCGAGAGCGUC 83.00 50 293 T 16948865 1480 HIV-1 (NL4-3) AF324493 Vif 131 GCAUCUCCUAUGGCAGGAAG 83.50 44 HEK 293a 19497094 1305 95MM-yIDU106 N/A Pol 4961 AGGUGAAGGGGCAGUAGUAAU 83.60 38 Hela 17996047

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