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Next   PreviousPage - 1 of 3 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) GC Content (%) Cell line PubMed 1441 HIV-1 (NL4-3) AF324493 Pol 242 AUACAGGAGCAGAUGAUACA 99.50 32 HEK 293a 19497094 1455 HIV-1 (NL4-3) AF324493 pol 926 AAGGAUCACCAGCAAUAUUC 91.50 32 HEK 293a 19497094 1472 HIV-1 (NL4-3) AF324493 pol 2885 GGGCAGUAGUAAUACAAGAU -112.00 32 HEK 293a 19497094 1479 HIV-1 (NL4-3) AF324493 Vif 37 GUAGACAGGAUGAGGAUUAA 95.10 32 HEK 293a 19497094 1516 HIV-1 (NL4-3) AF324493 Rev 159 GAGAGACUUACUCUUGAUUG 89.90 32 HEK 293a 19497094 1200 HIV-1 (LAI) K02013 Nef 8661 UAAAAGAAAAGGGGGGACU 8.00 33 293 T 16959541 1633 HIV-1 (NL4-3) AF324493 Gag/pol 1722 CUGAGAGACAGGCUAAUUU 91.00 33 293 FT cells 20949027 1589 pNL-ADA M19921 tat 5916 GUGUUGCUUUCAUUGCCAAGUUUGU 0.00 33 293 T 14581533 1099 HIV-1 HXB2 K03455 Nef 8914 CAUGGAGCAAUCACAAGUA 70.00 33 U87-CD4 16378959 1107 HIV-1 (NL4-3) AF324493 Tat 5888 CUGCUUGUACCAAUUGCUA 65.00 33 293 T 16840344 1206 HIV-1 HXB2 K03455 Gag 2294 AAGCUCUAUUAGAUACAGGAGC -24.00 33 Hela 17132935 1031 HIV-1 (NL4-3) AF324493 Tat 5888 CUGCUUGUACCAAUUGCUA 97.00 33 293 T 14557638 1030 HIV-1 (NL4-3) AF324493 Tat 5888 CUGCUUGUACCAAUUGCUA 93.00 33 293 T 12930953 1663 HIV-1 (NL4-3) AF324493 Nef 5888 CUGCUUGUACCAAUUGCUA 90.00 33 293T 12186906 1144 HIV-1 (LAI) K02013 Pol 4232 AUUCCCUACAAUCCCCAAA 44.00 33 293 T 16959541 1155 HIV-1 (LAI) K02013 Pol 4367 AAAAGAAAAGGGGGGAUUG -5.00 33 293 T 16959541 1182 HIV-1 (LAI) K02013 Pol/Vif 4622 UAUGGAAAACAGAUGGCAG 26.00 33 293 T 16959541 1199 HIV-1 (LAI) K02013 Nef 8660 UUAAAAGAAAAGGGGGGAC -20.00 33 293 T 16959541 1559 HIV-1 (NL4-3) AF324493 Env 6687 AAGAAUCCGUAUCCAGAGA 88.00 33 293 T 17173982 1301 95MM-yIDU106 N/A Pol 4809 UACAGUGCAGGGGAAAGAAUA 100.00 35 Hela 17996047 1337 93IN101 AB023804 Pol 4809 UACAGUGCAGGGGAAAGAAUA 97.10 35 Hela 17996047 1332 93IN101 AB023804 Pol 4750 CAGCAGUACAAAUGGCAGUAU 95.60 35 Hela 17996047 1331 93IN101 AB023804 Pol 4746 AAGACAGCAGUACAAAUGGCA 95.60 35 Hela 17996047 1313 93IN101 AB023804 LTR 521 AGCCUCAAUAAAGCUUGCCUU 92.60 35 Hela 17996047 1319 93IN101 AB023804 Gag 1490 GUGACAUAGCAGGAACUACUA 97.10 35 Hela 17996047

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