VIRsiRNAdb

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Total number of Results for Chikungunya Virus are 2
Results from 0 - 25

siRNA sequence "aauggccggaguccuuuaaga" alignment with "Chikungunya Virus" virus reference Genome sequences
siRNA sequence matching with "aauggccggaguccuuuaaga" Chikungunya Virus" Virus reference Genome sequences
Browse all the records for "Chikungunya Virus" virus
Browse "virsi2271 " record
Length: 21
GC Content:48 %
Starting position: 4194
Strain of Virus: DRDE-06
GenBank Acc: EF210157
Transfection Reagent: siPORT

Offtargets for "aauggccggaguccuuuaaga" siRNA in Human Genome sequences
See EF210157 at Genbank
Pubmed:18805396
Article:RNA interference mediated inhibition of Chikungunya virus replication in mammalian cells.
Authors:Dash PK, Tiwari M, Santhosh SR, Parida M, Lakshmana Rao PV.
Journal:Biochem Biophys Res Commun. 2008 Nov 28;376(4):718-22. Epub 2008 Sep 19.
Entrez:18805396

siRNA sequence "aacacggugggaguaccguau" alignment with "Chikungunya Virus" virus reference Genome sequences
siRNA sequence matching with "aacacggugggaguaccguau" Chikungunya Virus" Virus reference Genome sequences
Browse all the records for "Chikungunya Virus" virus
Browse "virsi2270 " record
Length: 21
GC Content:52 %
Starting position: 10018
Strain of Virus: DRDE-06
GenBank Acc: EF210157
Transfection Reagent: siPORT

Offtargets for "aacacggugggaguaccguau" siRNA in Human Genome sequences
See EF210157 at Genbank
Pubmed:18805396
Article:RNA interference mediated inhibition of Chikungunya virus replication in mammalian cells.
Authors:Dash PK, Tiwari M, Santhosh SR, Parida M, Lakshmana Rao PV.
Journal:Biochem Biophys Res Commun. 2008 Nov 28;376(4):718-22. Epub 2008 Sep 19.
Entrez:18805396


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2271	aauggccggaguccuuuaaga	Chikungunya Virus	NSP3	Vero	Viral Titer	100	18805396	Blast SL	refseqs
virsi2270	aacacggugggaguaccguau	Chikungunya Virus	E1	Vero	Viral Titer	96	18805396	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm