siRNA Datasets Used In this Algorithm:
1.VIRsiRNAdb (783)
2.HIVsirDB (240)
3.Patent (1204)
4.Unique (1725)
5.Training (1380)
6.Validation (345)
| siRNA ID | Sequence | Virus | PMID/Patent | Efficacy |
|---|---|---|---|---|
| 1550 | ucucuagcaguggcgcccg | HIV | 16840344 | 15 |
| 1561 | auggcaggaagaagcggag | HIV | 18180777 | 87 |
| 1118 | aaggagagagaugggugcg | HIV | 16959541 | 52 |
| 1119 | aggagagagaugggugcga | HIV | 16959541 | 93 |
| 1120 | ggagagagaugggugcgag | HIV | 16959541 | 93 |
| 1121 | gagagagaugggugcgaga | HIV | 16959541 | 98 |
| 1122 | agagagaugggugcgagag | HIV | 16959541 | 94 |
| 1123 | gagagaugggugcgagagc | HIV | 16959541 | 67 |
| 1124 | agagaugggugcgagagcg | HIV | 16959541 | 83 |
| 1125 | gagaugggugcgagagcgu | HIV | 16959541 | 78 |
| 1126 | agaugggugcgagagcguc | HIV | 16959541 | 90 |
| 1127 | aauaaaauaguaagaaugu | HIV | 16959541 | 26 |
| 1128 | auaaaauaguaagaaugua | HIV | 16959541 | 30 |
| 1129 | uagaagaaaugaugacagc | HIV | 16959541 | 45 |
| 1130 | agaagaaaugaugacagca | HIV | 16959541 | 64 |
| 1131 | gaagaaaugaugacagcau | HIV | 16959541 | 85 |
| 1132 | aagaaaugaugacagcaug | HIV | 16959541 | 74 |
| 1133 | caggcuaauuuuuuaggga | HIV | 16959541 | 20 |
| 1134 | aggcuaauuuuuuagggaa | HIV | 16959541 | 75 |
| 1135 | acaggagcagaugauacag | HIV | 16959541 | 96 |
| 1136 | caggagcagaugauacagu | HIV | 16959541 | 86 |
| 1137 | auggaaaccaaaaaugaua | HIV | 16959541 | 63 |
| 1138 | uggaaaccaaaaaugauag | HIV | 16959541 | 54 |
| 1139 | ggaaaccaaaaaugauagg | HIV | 16959541 | 0 |
| 1140 | auuggaggaaaugaacaag | HIV | 16959541 | 95 |
| 1141 | uuggaggaaaugaacaagu | HIV | 16959541 | 54 |
| 1142 | uuagcaggaagauggccag | HIV | 16959541 | 58 |
| 1143 | uagcaggaagauggccagu | HIV | 16959541 | 78 |
| 1144 | auucccuacaauccccaaa | HIV | 16959541 | 44 |
| 1145 | uucccuacaauccccaaag | HIV | 16959541 | 33 |
| 1146 | cacaauuuuaaaagaaaag | HIV | 16959541 | 26 |
| 1147 | acaauuuuaaaagaaaagg | HIV | 16959541 | -4 |
| 1148 | caauuuuaaaagaaaaggg | HIV | 16959541 | 32 |
| 1149 | aauuuuaaaagaaaagggg | HIV | 16959541 | 30 |
| 1150 | auuuuaaaagaaaaggggg | HIV | 16959541 | 37 |
| 1151 | uuuuaaaagaaaagggggg | HIV | 16959541 | 2 |
| 1152 | uuuaaaagaaaagggggga | HIV | 16959541 | 5 |
| 1153 | uuaaaagaaaaggggggau | HIV | 16959541 | 22 |
| 1154 | uaaaagaaaaggggggauu | HIV | 16959541 | 12 |
| 1155 | aaaagaaaaggggggauug | HIV | 16959541 | -5 |
| 1156 | aaagaaaaggggggauugg | HIV | 16959541 | 14 |
| 1157 | aagaaaaggggggauuggg | HIV | 16959541 | 18 |
| 1158 | agaaaaggggggauugggg | HIV | 16959541 | 24 |
| 1159 | gaaaaggggggauuggggg | HIV | 16959541 | -8 |
| 1160 | aaaaggggggauugggggg | HIV | 16959541 | 13 |
| 1161 | uacagugcaggggaaagaa | HIV | 16959541 | 74 |
| 1162 | acagugcaggggaaagaau | HIV | 16959541 | 23 |
| 1163 | cagugcaggggaaagaaua | HIV | 16959541 | 82 |
| 1164 | aaaauucaaaauuuucggg | HIV | 16959541 | 33 |
| 1165 | aaauucaaaauuuucgggu | HIV | 16959541 | 26 |
| 1166 | uucaaaauuuucggguuua | HIV | 16959541 | 15 |
| 1167 | ucaaaauuuucggguuuau | HIV | 16959541 | 26 |
| 1168 | caaaauuuucggguuuauu | HIV | 16959541 | 40 |
| 1169 | aauuuucggguuuauuaca | HIV | 16959541 | 20 |
| 1170 | auuuucggguuuauuacag | HIV | 16959541 | 8 |
| 1171 | cucuggaaaggugaagggg | HIV | 16959541 | 15 |
| 1172 | ucuggaaaggugaaggggc | HIV | 16959541 | 16 |
| 1173 | cuggaaaggugaaggggca | HIV | 16959541 | 35 |
| 1174 | uggaaaggugaaggggcag | HIV | 16959541 | 26 |
| 1175 | ggaaaggugaaggggcagu | HIV | 16959541 | 35 |
| 1176 | gaaaggugaaggggcagua | HIV | 16959541 | 45 |
| 1177 | aaaggugaaggggcaguag | HIV | 16959541 | 32 |
| 1178 | aaggugaaggggcaguagu | HIV | 16959541 | 76 |
| 1179 | aggugaaggggcaguagua | HIV | 16959541 | 93 |
| 1180 | ggugaaggggcaguaguaa | HIV | 16959541 | 32 |
| 1181 | gugaaggggcaguaguaau | HIV | 16959541 | 93 |
| 1182 | uauggaaaacagauggcag | HIV | 16959541 | 26 |
| 1183 | auggaaaacagauggcagg | HIV | 16959541 | 10 |
| 1184 | uggaaaacagauggcaggu | HIV | 16959541 | 15 |
| 1185 | ggaaaacagauggcaggug | HIV | 16959541 | 32 |
| 1186 | uccuauggcaggaagaagc | HIV | 16959541 | 51 |
| 1187 | ccuauggcaggaagaagcg | HIV | 16959541 | 38 |
| 1188 | cuauggcaggaagaagcgg | HIV | 16959541 | 46 |
| 1189 | uauggcaggaagaagcgga | HIV | 16959541 | 85 |
| 1190 | auggcaggaagaagcggag | HIV | 16959541 | 94 |
| 1191 | cagcaggaagcacuauggg | HIV | 16959541 | -12 |
| 1192 | agcaggaagcacuaugggc | HIV | 16959541 | 4 |
| 1193 | gcaggaagcacuaugggcg | HIV | 16959541 | 3 |
| 1194 | caggaagcacuaugggcgc | HIV | 16959541 | 24 |
| 1195 | cuuuuuaaaagaaaagggg | HIV | 16959541 | 54 |
| 1196 | uuuuuaaaagaaaaggggg | HIV | 16959541 | -13 |
| 1197 | uuuuaaaagaaaagggggg | HIV | 16959541 | -6 |
| 1198 | uuuaaaagaaaagggggga | HIV | 16959541 | 5 |
| 1199 | uuaaaagaaaaggggggac | HIV | 16959541 | -20 |
| 1200 | uaaaagaaaaggggggacu | HIV | 16959541 | 8 |
| 1201 | aaaagaaaaggggggacug | HIV | 16959541 | -14 |
| 1202 | aaagaaaaggggggacugg | HIV | 16959541 | -5 |
| 1203 | aagaaaaggggggacugga | HIV | 16959541 | -21 |
| 1559 | aagaauccguauccagaga | HIV | 17173982 | 88 |
| 1558 | ggcugguuuugcgauucua | HIV | 17173982 | 0 |
| 1557 | cauaauguuugggccacac | HIV | 17173982 | 18 |
| 1562 | acaggagcagaugauacag | HIV | 18180777 | 92 |
| 1400 | aggagagagaugggugcga | HIV | 19384894 | 89 |
| 1401 | ggagagagaugggugcgag | HIV | 19384894 | 87 |
| 1402 | gagagagaugggugcgaga | HIV | 19384894 | 97 |
| 1403 | agagagaugggugcgagag | HIV | 19384894 | 86 |
| 1404 | gagagaugggugcgagagc | HIV | 19384894 | 51 |
| 1405 | agagaugggugcgagagcg | HIV | 19384894 | 51 |
| 1406 | gagaugggugcgagagcgu | HIV | 19384894 | 61 |
| 1407 | agaugggugcgagagcguc | HIV | 19384894 | 87 |
| 1408 | gaagaaaugaugacagcau | HIV | 19384894 | 49 |
| 1409 | aagaaaugaugacagcaug | HIV | 19384894 | 15 |
| 1410 | caggcuaauuuuuuaggga | HIV | 19384894 | 83 |
| 1411 | aggcuaauuuuuuagggaa | HIV | 19384894 | 77 |
| 1412 | auuggaggaaaugaacaag | HIV | 19384894 | 54 |
| 1413 | uagcaggaagauggccagu | HIV | 19384894 | 57 |
| 1414 | cagugcaggggaaagaaua | HIV | 19384894 | 40 |
| 1415 | aaggugaaggggcaguagu | HIV | 19384894 | 72 |
| 1416 | aggugaaggggcaguagua | HIV | 19384894 | 68 |
| 1417 | gugaaggggcaguaguaau | HIV | 19384894 | 66 |
| 1418 | ggaaaacagauggcaggug | HIV | 19384894 | 3 |
| 1419 | uauggcaggaagaagcgga | HIV | 19384894 | 53 |
| 1420 | auggcaggaagaagcggag | HIV | 19384894 | 61 |
| 1421 | aagaaaaggggggacugga | HIV | 19384894 | 61 |
| 1563 | gaagaaaugaugacagcau | HIV | 18180777 | 84 |
| 1564 | gugaaggggcaguaguaau | HIV | 18180777 | 86 |
| 1569 | gugccuggcuagaagcaca | HIV | 18727943 | 15 |
| 1005 | agcacacaaguagacccug | HIV | 12087358 | 95 |
| 1006 | cuuggcacuagcagcauua | HIV | 12087358 | 95.9 |
| 1007 | gugccuggcuagaagcaca | HIV | 12087358 | 95.9 |
| 1008 | agaccagaucugagccugg | HIV | 12087358 | 95.9 |
| 1016 | uauggcaggaagaagcgga | HIV | 12438622 | 61 |
| 1017 | cuagagcccuggaagcauc | HIV | 12438622 | 64 |
| 1018 | gaagcggagacagcgacga | HIV | 12438622 | 51 |
| 1019 | gagacaccagggauuagau | HIV | 12438622 | 37 |
| 1020 | ugagacaccagggauuaga | HIV | 12438622 | 68 |
| 1021 | gcccuaucccuuuacguca | HIV | 12438622 | 55 |
| 1022 | uauggcaggaagaagcgga | HIV | 12438622 | 94 |
| 1023 | cuagagcccuggaagcauc | HIV | 12438622 | 90 |
| 1024 | gaagcggagacagcgacga | HIV | 12438622 | 95 |
| 1025 | gagacaccagggauuagau | HIV | 12438622 | 98 |
| 1026 | ugagacaccagggauuaga | HIV | 12438622 | 96 |
| 1027 | gcccuaucccuuuacguca | HIV | 12438622 | 90 |
| 1028 | ugagacaccagggauuaga | HIV | 12438622 | 68 |
| 1030 | cugcuuguaccaauugcua | HIV | 12930953 | 93 |
| 1031 | cugcuuguaccaauugcua | HIV | 14557638 | 97 |
| 1071 | gugccuggcuagaagcaca | HIV | 15687388 | 90 |
| 1094 | ggaaagcuaaggacugguu | HIV | 15851006 | 87 |
| 1098 | gacaguacuaaauggagaa | HIV | 16378959 | 80 |
| 1099 | cauggagcaaucacaagua | HIV | 16378959 | 70 |
| 1101 | gugccuggcuagaagcaca | HIV | 16697708 | 87 |
| 1102 | gggugcgagagcgucaaua | HIV | 16706616 | 73 |
| 1106 | gugccuggcuagaagcaca | HIV | 16708080 | 94 |
| 1107 | cugcuuguaccaauugcua | HIV | 16840344 | 65 |
| 1108 | ggagagcaauggcuaguga | HIV | 16840344 | 78 |
| 1109 | gacuggaagggcuaauuca | HIV | 16840344 | 50 |
| 1114 | agaugggugcgagagcguc | HIV | 16948865 | 83 |
| 1115 | cagugcaggggaaagaaua | HIV | 16948865 | 92 |
| 1116 | gugccuggcuagaagcaca | HIV | 16948865 | 83 |
| 1117 | gggacuggaagggcuaauu | HIV | 16948865 | 88 |
| 1211 | aagaaaaggggggacugga | HIV | 17331227 | 98 |
| 1212 | gaagaaaugaugacagcau | HIV | 17331227 | 97 |
| 1216 | ggagagagaugggugcgag | HIV | 17628029 | 3 |
| 1217 | agaugggugcgagagcguc | HIV | 17628029 | 30 |
| 1218 | gaagaaaugaugacagcau | HIV | 17628029 | 48 |
| 1219 | acaggagcagaugauacag | HIV | 17628029 | 48 |
| 1220 | auuggaggaaaugaacaag | HIV | 17628029 | 14 |
| 1221 | uagcaggaagauggccagu | HIV | 17628029 | 22 |
| 1222 | cagugcaggggaaagaaua | HIV | 17628029 | 33 |
| 1223 | aggugaaggggcaguagua | HIV | 17628029 | 44 |
| 1224 | gugaaggggcaguaguaau | HIV | 17628029 | 78 |
| 1225 | auggcaggaagaagcggag | HIV | 17628029 | 94 |
| 1226 | gugccuggcuagaagcaca | HIV | 17628029 | 4 |
| 1227 | gggacuggaagggcuaauu | HIV | 17628029 | -99 |
| 1228 | gacaguacuaaauggagaa | HIV | 17652404 | 90 |
| 1551 | gggacuggaagggcuaauu | HIV | 19672247 | 95 |
| 1374 | gccugugccucuucagcua | HIV | 18068205 | 90 |
| 1375 | agaaggaugucaacaaaua | HIV | 18199654 | 74 |
| 1388 | agaugggugcgagagcguu | HIV | 18346971 | 66 |
| 1391 | gaggggaccagggagagca | HIV | 18510865 | 63 |
| 1392 | acuuacucuugauuguaac | HIV | 18510865 | 38 |
| 1393 | gaccagaucugagccuggg | HIV | 18996348 | -10 |
| 1394 | gaucugagccugggagcuc | HIV | 18996348 | 4 |
| 1434 | gagccaccccacaagauuu | HIV | 19497094 | 95.9 |
| 1436 | agccaccccacaagauuua | HIV | 19497094 | 85.3 |
| 1519 | gugaaggggcaguaguaau | HIV | 19656954 | 82 |
| 1520 | auggcaggaagaagcggag | HIV | 19656954 | 94 |
| 1521 | auggcaggaagaagcggag | HIV | 19672247 | 75 |
| 1522 | acaggagcagaugauacag | HIV | 19672247 | 92 |
| 1523 | gaagaaaugaugacagcau | HIV | 19672247 | 95 |
| 1524 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
| 1525 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
| 1526 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
| 1527 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
| 1528 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
| 1530 | gacugcugacaucgagcuu | HIV | 19771207 | 0 |
| 1531 | cuggggaguggcgagcccu | HIV | 19771207 | 0 |
| 1533 | gugaaggggcaguaguaau | HIV | 20188764 | 70 |
| 1534 | uagcaggaagauggccagu | HIV | 20188764 | 37 |
| 1535 | auggcaggaagaagcggag | HIV | 20188764 | 48 |
| 1536 | auggcaggaagaagcggag | HIV | 20188764 | 57 |
| 1537 | auggcaggaagaagcggag | HIV | 20188764 | 78 |
| 1538 | auggcaggaagaagcggag | HIV | 20188764 | 72 |
| 1543 | gggacuggaagggcuaauu | HIV | 16948865 | 95 |
| 1585 | gauuguacugagagacagg | HIV | 15831707 | 88 |
| 1587 | guucagaaguacacauccc | HIV | 15831707 | 85 |
| 1586 | guucagaaguacacauccc | HIV | 15831707 | 75 |
| 1584 | guucagaaguacacauccc | HIV | 15831707 | 80 |
| 1583 | gauuguacugagagacagg | HIV | 15831707 | 85 |
| 1582 | guucagaaguacacauccc | HIV | 15831707 | 95 |
| 1581 | guucagaaguacacauccc | HIV | 15831707 | 82 |
| 1580 | gauuguacugagagacagg | HIV | 15831707 | 90 |
| 1579 | ggcacuuaucugggacgau | HIV | 15831707 | 23 |
| 1578 | guucagaaguacacauccc | HIV | 15831707 | 80 |
| 1577 | gauuguacugagagacagg | HIV | 15831707 | 88 |
| 1576 | ggcacuuaucugggacgau | HIV | 15831707 | 75 |
| 1575 | guucagaaguacacauccc | HIV | 15831707 | 80 |
| 1574 | gauuguacugagagacagg | HIV | 15831707 | 91 |
| 1573 | ggcacuuaucugggacgau | HIV | 15831707 | 96 |
| 1588 | guucagaaguacacauccc | HIV | 15831707 | 85 |
| 1604 | acaggagcagaugauacag | HIV | 17715143 | 90 |
| 1605 | uccuuggguucuuaggagc | HIV | 15894278 | 85.6 |
| 1606 | ccuuggguucuuaggagcu | HIV | 15894278 | 64.6 |
| 1603 | gggacuggaagggcuaauu | HIV | 17715143 | 90 |
| 1602 | gaaccaaggggaagugaca | HIV | 17715143 | 92 |
| 1601 | auggcaggaagaagcggag | HIV | 18077712 | 0 |
| 1600 | gugaaggggcaguaguaau | HIV | 18077712 | 100 |
| 1599 | acaggagcagaugauacag | HIV | 18077712 | 0 |
| 1598 | gaagaaaugaugacagcau | HIV | 18077712 | 0 |
| 1597 | gugccuggcuagaagcaca | HIV | 14963165 | 100 |
| 1596 | ggcuagaaggagagagaug | HIV | 14963165 | 0 |
| 1595 | gcggaggcuagaaggagag | HIV | 14963165 | 0 |
| 1594 | ccuauggcaggaagaagcg | HIV | 14963165 | 0 |
| 1593 | gccuuaggcaucuccuaug | HIV | 14963165 | 0 |
| 1592 | ggggggacuggaagggcua | HIV | 14963165 | 0 |
| 1610 | gggacuuuccgcuggggac | HIV | 18519571 | 200 |
| 1612 | gacugcugacaucgagcuu | HIV | 18519571 | 0 |
| 1620 | ggcccaagaagaacaugag | HIV | 17592732 | 90 |
| 1621 | ccuaccaccuguaguagca | HIV | 17592732 | 11 |
| 1622 | guagacuguagcccaggaa | HIV | 17592732 | 49 |
| 1623 | gagaucaggcugaacaucu | HIV | 17592732 | 95 |
| 1633 | cugagagacaggcuaauuu | HIV | 20949027 | 91 |
| 1660 | cauguggcaggaaguagga | HIV | 17176628 | 91 |
| 1663 | cugcuuguaccaauugcua | HIV | 12186906 | 90 |
| 1664 | cggauccuuagcacuuauc | HIV | 12186906 | 92 |
| 1667 | cauguggcaggaaguagga | HIV | 17176628 | 97 |
| 1670 | cauguggcaggaaguagga | HIV | 17176628 | 98 |
| 1671 | gugaaggggcaguaguaau | HIV | 20529316 | 85 |
| 1675 | cugccuggcuagaagcaca | HIV | 18668146 | 41 |
| 1677 | agacaagcacauuguaaca | HIV | 20833635 | 0 |