siRNA Datasets Used In this Algorithm:
1.VIRsiRNAdb (783)
2.HIVsirDB (240)
3.Patent (1204)
4.Unique (1725)
5.Training (1380)
6.Validation (345)
siRNA ID | Sequence | Virus | PMID/Patent | Efficacy |
---|---|---|---|---|
1550 | ucucuagcaguggcgcccg | HIV | 16840344 | 15 |
1561 | auggcaggaagaagcggag | HIV | 18180777 | 87 |
1118 | aaggagagagaugggugcg | HIV | 16959541 | 52 |
1119 | aggagagagaugggugcga | HIV | 16959541 | 93 |
1120 | ggagagagaugggugcgag | HIV | 16959541 | 93 |
1121 | gagagagaugggugcgaga | HIV | 16959541 | 98 |
1122 | agagagaugggugcgagag | HIV | 16959541 | 94 |
1123 | gagagaugggugcgagagc | HIV | 16959541 | 67 |
1124 | agagaugggugcgagagcg | HIV | 16959541 | 83 |
1125 | gagaugggugcgagagcgu | HIV | 16959541 | 78 |
1126 | agaugggugcgagagcguc | HIV | 16959541 | 90 |
1127 | aauaaaauaguaagaaugu | HIV | 16959541 | 26 |
1128 | auaaaauaguaagaaugua | HIV | 16959541 | 30 |
1129 | uagaagaaaugaugacagc | HIV | 16959541 | 45 |
1130 | agaagaaaugaugacagca | HIV | 16959541 | 64 |
1131 | gaagaaaugaugacagcau | HIV | 16959541 | 85 |
1132 | aagaaaugaugacagcaug | HIV | 16959541 | 74 |
1133 | caggcuaauuuuuuaggga | HIV | 16959541 | 20 |
1134 | aggcuaauuuuuuagggaa | HIV | 16959541 | 75 |
1135 | acaggagcagaugauacag | HIV | 16959541 | 96 |
1136 | caggagcagaugauacagu | HIV | 16959541 | 86 |
1137 | auggaaaccaaaaaugaua | HIV | 16959541 | 63 |
1138 | uggaaaccaaaaaugauag | HIV | 16959541 | 54 |
1139 | ggaaaccaaaaaugauagg | HIV | 16959541 | 0 |
1140 | auuggaggaaaugaacaag | HIV | 16959541 | 95 |
1141 | uuggaggaaaugaacaagu | HIV | 16959541 | 54 |
1142 | uuagcaggaagauggccag | HIV | 16959541 | 58 |
1143 | uagcaggaagauggccagu | HIV | 16959541 | 78 |
1144 | auucccuacaauccccaaa | HIV | 16959541 | 44 |
1145 | uucccuacaauccccaaag | HIV | 16959541 | 33 |
1146 | cacaauuuuaaaagaaaag | HIV | 16959541 | 26 |
1147 | acaauuuuaaaagaaaagg | HIV | 16959541 | -4 |
1148 | caauuuuaaaagaaaaggg | HIV | 16959541 | 32 |
1149 | aauuuuaaaagaaaagggg | HIV | 16959541 | 30 |
1150 | auuuuaaaagaaaaggggg | HIV | 16959541 | 37 |
1151 | uuuuaaaagaaaagggggg | HIV | 16959541 | 2 |
1152 | uuuaaaagaaaagggggga | HIV | 16959541 | 5 |
1153 | uuaaaagaaaaggggggau | HIV | 16959541 | 22 |
1154 | uaaaagaaaaggggggauu | HIV | 16959541 | 12 |
1155 | aaaagaaaaggggggauug | HIV | 16959541 | -5 |
1156 | aaagaaaaggggggauugg | HIV | 16959541 | 14 |
1157 | aagaaaaggggggauuggg | HIV | 16959541 | 18 |
1158 | agaaaaggggggauugggg | HIV | 16959541 | 24 |
1159 | gaaaaggggggauuggggg | HIV | 16959541 | -8 |
1160 | aaaaggggggauugggggg | HIV | 16959541 | 13 |
1161 | uacagugcaggggaaagaa | HIV | 16959541 | 74 |
1162 | acagugcaggggaaagaau | HIV | 16959541 | 23 |
1163 | cagugcaggggaaagaaua | HIV | 16959541 | 82 |
1164 | aaaauucaaaauuuucggg | HIV | 16959541 | 33 |
1165 | aaauucaaaauuuucgggu | HIV | 16959541 | 26 |
1166 | uucaaaauuuucggguuua | HIV | 16959541 | 15 |
1167 | ucaaaauuuucggguuuau | HIV | 16959541 | 26 |
1168 | caaaauuuucggguuuauu | HIV | 16959541 | 40 |
1169 | aauuuucggguuuauuaca | HIV | 16959541 | 20 |
1170 | auuuucggguuuauuacag | HIV | 16959541 | 8 |
1171 | cucuggaaaggugaagggg | HIV | 16959541 | 15 |
1172 | ucuggaaaggugaaggggc | HIV | 16959541 | 16 |
1173 | cuggaaaggugaaggggca | HIV | 16959541 | 35 |
1174 | uggaaaggugaaggggcag | HIV | 16959541 | 26 |
1175 | ggaaaggugaaggggcagu | HIV | 16959541 | 35 |
1176 | gaaaggugaaggggcagua | HIV | 16959541 | 45 |
1177 | aaaggugaaggggcaguag | HIV | 16959541 | 32 |
1178 | aaggugaaggggcaguagu | HIV | 16959541 | 76 |
1179 | aggugaaggggcaguagua | HIV | 16959541 | 93 |
1180 | ggugaaggggcaguaguaa | HIV | 16959541 | 32 |
1181 | gugaaggggcaguaguaau | HIV | 16959541 | 93 |
1182 | uauggaaaacagauggcag | HIV | 16959541 | 26 |
1183 | auggaaaacagauggcagg | HIV | 16959541 | 10 |
1184 | uggaaaacagauggcaggu | HIV | 16959541 | 15 |
1185 | ggaaaacagauggcaggug | HIV | 16959541 | 32 |
1186 | uccuauggcaggaagaagc | HIV | 16959541 | 51 |
1187 | ccuauggcaggaagaagcg | HIV | 16959541 | 38 |
1188 | cuauggcaggaagaagcgg | HIV | 16959541 | 46 |
1189 | uauggcaggaagaagcgga | HIV | 16959541 | 85 |
1190 | auggcaggaagaagcggag | HIV | 16959541 | 94 |
1191 | cagcaggaagcacuauggg | HIV | 16959541 | -12 |
1192 | agcaggaagcacuaugggc | HIV | 16959541 | 4 |
1193 | gcaggaagcacuaugggcg | HIV | 16959541 | 3 |
1194 | caggaagcacuaugggcgc | HIV | 16959541 | 24 |
1195 | cuuuuuaaaagaaaagggg | HIV | 16959541 | 54 |
1196 | uuuuuaaaagaaaaggggg | HIV | 16959541 | -13 |
1197 | uuuuaaaagaaaagggggg | HIV | 16959541 | -6 |
1198 | uuuaaaagaaaagggggga | HIV | 16959541 | 5 |
1199 | uuaaaagaaaaggggggac | HIV | 16959541 | -20 |
1200 | uaaaagaaaaggggggacu | HIV | 16959541 | 8 |
1201 | aaaagaaaaggggggacug | HIV | 16959541 | -14 |
1202 | aaagaaaaggggggacugg | HIV | 16959541 | -5 |
1203 | aagaaaaggggggacugga | HIV | 16959541 | -21 |
1559 | aagaauccguauccagaga | HIV | 17173982 | 88 |
1558 | ggcugguuuugcgauucua | HIV | 17173982 | 0 |
1557 | cauaauguuugggccacac | HIV | 17173982 | 18 |
1562 | acaggagcagaugauacag | HIV | 18180777 | 92 |
1400 | aggagagagaugggugcga | HIV | 19384894 | 89 |
1401 | ggagagagaugggugcgag | HIV | 19384894 | 87 |
1402 | gagagagaugggugcgaga | HIV | 19384894 | 97 |
1403 | agagagaugggugcgagag | HIV | 19384894 | 86 |
1404 | gagagaugggugcgagagc | HIV | 19384894 | 51 |
1405 | agagaugggugcgagagcg | HIV | 19384894 | 51 |
1406 | gagaugggugcgagagcgu | HIV | 19384894 | 61 |
1407 | agaugggugcgagagcguc | HIV | 19384894 | 87 |
1408 | gaagaaaugaugacagcau | HIV | 19384894 | 49 |
1409 | aagaaaugaugacagcaug | HIV | 19384894 | 15 |
1410 | caggcuaauuuuuuaggga | HIV | 19384894 | 83 |
1411 | aggcuaauuuuuuagggaa | HIV | 19384894 | 77 |
1412 | auuggaggaaaugaacaag | HIV | 19384894 | 54 |
1413 | uagcaggaagauggccagu | HIV | 19384894 | 57 |
1414 | cagugcaggggaaagaaua | HIV | 19384894 | 40 |
1415 | aaggugaaggggcaguagu | HIV | 19384894 | 72 |
1416 | aggugaaggggcaguagua | HIV | 19384894 | 68 |
1417 | gugaaggggcaguaguaau | HIV | 19384894 | 66 |
1418 | ggaaaacagauggcaggug | HIV | 19384894 | 3 |
1419 | uauggcaggaagaagcgga | HIV | 19384894 | 53 |
1420 | auggcaggaagaagcggag | HIV | 19384894 | 61 |
1421 | aagaaaaggggggacugga | HIV | 19384894 | 61 |
1563 | gaagaaaugaugacagcau | HIV | 18180777 | 84 |
1564 | gugaaggggcaguaguaau | HIV | 18180777 | 86 |
1569 | gugccuggcuagaagcaca | HIV | 18727943 | 15 |
1005 | agcacacaaguagacccug | HIV | 12087358 | 95 |
1006 | cuuggcacuagcagcauua | HIV | 12087358 | 95.9 |
1007 | gugccuggcuagaagcaca | HIV | 12087358 | 95.9 |
1008 | agaccagaucugagccugg | HIV | 12087358 | 95.9 |
1016 | uauggcaggaagaagcgga | HIV | 12438622 | 61 |
1017 | cuagagcccuggaagcauc | HIV | 12438622 | 64 |
1018 | gaagcggagacagcgacga | HIV | 12438622 | 51 |
1019 | gagacaccagggauuagau | HIV | 12438622 | 37 |
1020 | ugagacaccagggauuaga | HIV | 12438622 | 68 |
1021 | gcccuaucccuuuacguca | HIV | 12438622 | 55 |
1022 | uauggcaggaagaagcgga | HIV | 12438622 | 94 |
1023 | cuagagcccuggaagcauc | HIV | 12438622 | 90 |
1024 | gaagcggagacagcgacga | HIV | 12438622 | 95 |
1025 | gagacaccagggauuagau | HIV | 12438622 | 98 |
1026 | ugagacaccagggauuaga | HIV | 12438622 | 96 |
1027 | gcccuaucccuuuacguca | HIV | 12438622 | 90 |
1028 | ugagacaccagggauuaga | HIV | 12438622 | 68 |
1030 | cugcuuguaccaauugcua | HIV | 12930953 | 93 |
1031 | cugcuuguaccaauugcua | HIV | 14557638 | 97 |
1071 | gugccuggcuagaagcaca | HIV | 15687388 | 90 |
1094 | ggaaagcuaaggacugguu | HIV | 15851006 | 87 |
1098 | gacaguacuaaauggagaa | HIV | 16378959 | 80 |
1099 | cauggagcaaucacaagua | HIV | 16378959 | 70 |
1101 | gugccuggcuagaagcaca | HIV | 16697708 | 87 |
1102 | gggugcgagagcgucaaua | HIV | 16706616 | 73 |
1106 | gugccuggcuagaagcaca | HIV | 16708080 | 94 |
1107 | cugcuuguaccaauugcua | HIV | 16840344 | 65 |
1108 | ggagagcaauggcuaguga | HIV | 16840344 | 78 |
1109 | gacuggaagggcuaauuca | HIV | 16840344 | 50 |
1114 | agaugggugcgagagcguc | HIV | 16948865 | 83 |
1115 | cagugcaggggaaagaaua | HIV | 16948865 | 92 |
1116 | gugccuggcuagaagcaca | HIV | 16948865 | 83 |
1117 | gggacuggaagggcuaauu | HIV | 16948865 | 88 |
1211 | aagaaaaggggggacugga | HIV | 17331227 | 98 |
1212 | gaagaaaugaugacagcau | HIV | 17331227 | 97 |
1216 | ggagagagaugggugcgag | HIV | 17628029 | 3 |
1217 | agaugggugcgagagcguc | HIV | 17628029 | 30 |
1218 | gaagaaaugaugacagcau | HIV | 17628029 | 48 |
1219 | acaggagcagaugauacag | HIV | 17628029 | 48 |
1220 | auuggaggaaaugaacaag | HIV | 17628029 | 14 |
1221 | uagcaggaagauggccagu | HIV | 17628029 | 22 |
1222 | cagugcaggggaaagaaua | HIV | 17628029 | 33 |
1223 | aggugaaggggcaguagua | HIV | 17628029 | 44 |
1224 | gugaaggggcaguaguaau | HIV | 17628029 | 78 |
1225 | auggcaggaagaagcggag | HIV | 17628029 | 94 |
1226 | gugccuggcuagaagcaca | HIV | 17628029 | 4 |
1227 | gggacuggaagggcuaauu | HIV | 17628029 | -99 |
1228 | gacaguacuaaauggagaa | HIV | 17652404 | 90 |
1551 | gggacuggaagggcuaauu | HIV | 19672247 | 95 |
1374 | gccugugccucuucagcua | HIV | 18068205 | 90 |
1375 | agaaggaugucaacaaaua | HIV | 18199654 | 74 |
1388 | agaugggugcgagagcguu | HIV | 18346971 | 66 |
1391 | gaggggaccagggagagca | HIV | 18510865 | 63 |
1392 | acuuacucuugauuguaac | HIV | 18510865 | 38 |
1393 | gaccagaucugagccuggg | HIV | 18996348 | -10 |
1394 | gaucugagccugggagcuc | HIV | 18996348 | 4 |
1434 | gagccaccccacaagauuu | HIV | 19497094 | 95.9 |
1436 | agccaccccacaagauuua | HIV | 19497094 | 85.3 |
1519 | gugaaggggcaguaguaau | HIV | 19656954 | 82 |
1520 | auggcaggaagaagcggag | HIV | 19656954 | 94 |
1521 | auggcaggaagaagcggag | HIV | 19672247 | 75 |
1522 | acaggagcagaugauacag | HIV | 19672247 | 92 |
1523 | gaagaaaugaugacagcau | HIV | 19672247 | 95 |
1524 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
1525 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
1526 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
1527 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
1528 | gggacuuuccgcuggggac | HIV | 19771207 | 0 |
1530 | gacugcugacaucgagcuu | HIV | 19771207 | 0 |
1531 | cuggggaguggcgagcccu | HIV | 19771207 | 0 |
1533 | gugaaggggcaguaguaau | HIV | 20188764 | 70 |
1534 | uagcaggaagauggccagu | HIV | 20188764 | 37 |
1535 | auggcaggaagaagcggag | HIV | 20188764 | 48 |
1536 | auggcaggaagaagcggag | HIV | 20188764 | 57 |
1537 | auggcaggaagaagcggag | HIV | 20188764 | 78 |
1538 | auggcaggaagaagcggag | HIV | 20188764 | 72 |
1543 | gggacuggaagggcuaauu | HIV | 16948865 | 95 |
1585 | gauuguacugagagacagg | HIV | 15831707 | 88 |
1587 | guucagaaguacacauccc | HIV | 15831707 | 85 |
1586 | guucagaaguacacauccc | HIV | 15831707 | 75 |
1584 | guucagaaguacacauccc | HIV | 15831707 | 80 |
1583 | gauuguacugagagacagg | HIV | 15831707 | 85 |
1582 | guucagaaguacacauccc | HIV | 15831707 | 95 |
1581 | guucagaaguacacauccc | HIV | 15831707 | 82 |
1580 | gauuguacugagagacagg | HIV | 15831707 | 90 |
1579 | ggcacuuaucugggacgau | HIV | 15831707 | 23 |
1578 | guucagaaguacacauccc | HIV | 15831707 | 80 |
1577 | gauuguacugagagacagg | HIV | 15831707 | 88 |
1576 | ggcacuuaucugggacgau | HIV | 15831707 | 75 |
1575 | guucagaaguacacauccc | HIV | 15831707 | 80 |
1574 | gauuguacugagagacagg | HIV | 15831707 | 91 |
1573 | ggcacuuaucugggacgau | HIV | 15831707 | 96 |
1588 | guucagaaguacacauccc | HIV | 15831707 | 85 |
1604 | acaggagcagaugauacag | HIV | 17715143 | 90 |
1605 | uccuuggguucuuaggagc | HIV | 15894278 | 85.6 |
1606 | ccuuggguucuuaggagcu | HIV | 15894278 | 64.6 |
1603 | gggacuggaagggcuaauu | HIV | 17715143 | 90 |
1602 | gaaccaaggggaagugaca | HIV | 17715143 | 92 |
1601 | auggcaggaagaagcggag | HIV | 18077712 | 0 |
1600 | gugaaggggcaguaguaau | HIV | 18077712 | 100 |
1599 | acaggagcagaugauacag | HIV | 18077712 | 0 |
1598 | gaagaaaugaugacagcau | HIV | 18077712 | 0 |
1597 | gugccuggcuagaagcaca | HIV | 14963165 | 100 |
1596 | ggcuagaaggagagagaug | HIV | 14963165 | 0 |
1595 | gcggaggcuagaaggagag | HIV | 14963165 | 0 |
1594 | ccuauggcaggaagaagcg | HIV | 14963165 | 0 |
1593 | gccuuaggcaucuccuaug | HIV | 14963165 | 0 |
1592 | ggggggacuggaagggcua | HIV | 14963165 | 0 |
1610 | gggacuuuccgcuggggac | HIV | 18519571 | 200 |
1612 | gacugcugacaucgagcuu | HIV | 18519571 | 0 |
1620 | ggcccaagaagaacaugag | HIV | 17592732 | 90 |
1621 | ccuaccaccuguaguagca | HIV | 17592732 | 11 |
1622 | guagacuguagcccaggaa | HIV | 17592732 | 49 |
1623 | gagaucaggcugaacaucu | HIV | 17592732 | 95 |
1633 | cugagagacaggcuaauuu | HIV | 20949027 | 91 |
1660 | cauguggcaggaaguagga | HIV | 17176628 | 91 |
1663 | cugcuuguaccaauugcua | HIV | 12186906 | 90 |
1664 | cggauccuuagcacuuauc | HIV | 12186906 | 92 |
1667 | cauguggcaggaaguagga | HIV | 17176628 | 97 |
1670 | cauguggcaggaaguagga | HIV | 17176628 | 98 |
1671 | gugaaggggcaguaguaau | HIV | 20529316 | 85 |
1675 | cugccuggcuagaagcaca | HIV | 18668146 | 41 |
1677 | agacaagcacauuguaaca | HIV | 20833635 | 0 |