siRNA Datasets Used In this Algorithm:
1.VIRsiRNAdb (783)
2.HIVsirDB (240)
3.Patent (1204)
4.Unique (1725)
5.Training (1380)
6.Validation (345)

1380 siRNAs in Training dataset

siRNA ID	Sequence	Virus	PMID/Patent	Efficacy
PAT184	uacugacagccagacagcg	Influenza	WO 2007/053696 A2	-133
PAT143	ccccucaaagccgagaucg	Influenza	WO 2007/053696 A2	-86
PAT51	gucuucuaaccgaggucga	Influenza	WO 2007/053696 A2	-74
PAT72	ugcaugauaaaggcagucc	Influenza	WO 2007/053696 A2	-65
PAT48	caaaugcauuuaucgucgc	Influenza	WO 2007/053696 A2	-58
PAT25	cuaaccgaggucgaaacgu	Influenza	WO 2007/053696 A2	-52
PAT45	uguggauucuugaucgucu	Influenza	WO 2007/053696 A2	-49
PAT64	aggcaacgaacccgaucgu	Influenza	WO 2007/053696 A2	-44
PAT194	ccgaucgugccuuccuuug	Influenza	WO 2007/053696 A2	-40
PAT290	ccaaaucaguuggcaacaa	Metapneumovirus	US 2010/0254945 A1	-39.1
PAT61	ccucugaugauuucgcucu	Influenza	WO 2007/053696 A2	-36
PAT134	ggauucuugaucgucuuuu	Influenza	WO 2007/053696 A2	-34
PAT1	uggaagcaauggcuuuccu	Influenza	WO 2007/053696 A2	-31
PAT176	agcauacuuacugacagcc	Influenza	WO 2007/053696 A2	-27
PAT313	gcacuucacaacuugauau	Metapneumovirus	US 2010/0254945 A1	-24.5
PAT132	gauauuguggauucuugau	Influenza	WO 2007/053696 A2	-24
PAT133	auauuguggauucuugauc	Influenza	WO 2007/053696 A2	-22
PAT219	cuaagugaucugucauaua	Metapneumovirus	US 2010/0254945 A1	-20.6
PAT379	ggauuuaaaaacugguuua	Metapneumovirus	US 2010/0254945 A1	-20
PAT349	ggagaaaguauacuaguua	Metapneumovirus	US 2010/0254945 A1	-18.5
AL-DP-8042	auaucaaauauuagugaag	HPV	US20110230546A1	-17.14
A18562	cccugcugcaacauggaca	Ebola Zaire virus	US 7759320	-16.6
A18500	uaaaaccuucaucauccuu	Ebola Zaire virus	US 7759320	-14.7
PAT15	ccucaaagccgagaucgcg	Influenza	WO 2007/053696 A2	-14
A18610	aaaagugaugaagauuaag	Ebola Zaire virus	US 7759320	-12.8
1191	cagcaggaagcacuauggg	HIV	16959541	-12
PAT138	ucaggcccccucaaagccg	Influenza	WO 2007/053696 A2	-11
A18658	augucagugauuauuauaa	Ebola Zaire virus	US 7759320	-10.4
PAT405	gguuagagcauaucuugaa	Metapneumovirus	US 2010/0254945 A1	-9.8
PAT384	ccaguucagacuacaacaa	Metapneumovirus	US 2010/0254945 A1	-8.6
1159	gaaaaggggggauuggggg	HIV	16959541	-8
PAT307	cgcauaguuaguuaauuaa	Metapneumovirus	US 2010/0254945 A1	-7.3
PAT299	ggagaaaaggauuuggaau	Metapneumovirus	US 2010/0254945 A1	-6.9
PAT293	gcgauagccaaaaccauaa	Metapneumovirus	US 2010/0254945 A1	-6.2
A18626	cugaaaacugcuacaaucu	Ebola Zaire virus	US 7759320	-5.9
PAT386	ggaaguuaacaagaaauua	Metapneumovirus	US 2010/0254945 A1	-5.4
PAT254	ccgaagauugcuagaucuu	Metapneumovirus	US 2010/0254945 A1	-4.5
PAT192	gccagacagcgaccaaaag	Influenza	WO 2007/053696 A2	-4
AD-14825	uuguuagaauuuuugcugg	JCV	US08058257	-2.71
PAT390	cccuaagguucuuuacuuu	Metapneumovirus	US 2010/0254945 A1	-1.2
PAT331	ggguaaguaacaaccugaa	Metapneumovirus	US 2010/0254945 A1	-0.1
virsi2336	aacagcauauugacgcugg	Dengue Virus [DENV]	21795337	0
virsi2334	gguuagaggagaccccucc	Dengue Virus [DENV]	21795337	0
virsi2298	cagugauaaagguaaagaa	Hazara Nairovirus	21600011	0
virsi1012	ugauagugcaguagcugag	Hepatitis A Virus [HAV]	15120607	0
virsi1972	ggaagcaguuccucuggaa	Hepatitis C Virus [HCV]	20464448	0
1592	ggggggacuggaagggcua	HIV	14963165	0
1524	gggacuuuccgcuggggac	HIV	19771207	0
virsi1812	cgcuagcacucugguauca	Human Coxsackievirus [CV]	18691577	0
virsi1814	guaccuuugugcgccuguu	Human Coxsackievirus [CV]	18691577	0
virsi1751	caccuacauugcaugaaua	Human Papillomavirus [HPV]	18755502	0
PAT104	accaauccugucaccucug	Influenza	WO 2007/053696 A2	0
virsi1530	guccuccgaugaggacucc	Influenza A Virus	12594334	0
New_39	gauguucggugcauuaauu	orthopoxvirus	18572748	0
New_44	aaauaucagucuccaguua	orthopoxvirus	18572748	0
virsi1340	auugcguagcgagacacug	SARS Coronavirus	15220426	0
128	ggaaaugaaaucagaacuu	RSV	US20100254945A1	0.8890198
PAT57	uaccacauucccuuauacu	Influenza	WO 2007/053696 A2	1
75	ggaaagugaugauuaucau	RSV	US20100254945A1	1.9739514
PAT240	gaguuggguagaagaaaua	Metapneumovirus	US 2010/0254945 A1	2
A18628	ugaaaacugcuacaaucuu	Ebola Zaire virus	US 7759320	2.3
AD-14925	uacauggaauaguucagag	JCV	US08058257	2.84
PAT473	cuagaaucaauaaagggca	RSV	EP1833490A2	3
37	ggacuagagacuacaguua	RSV	US20100254945A1	3.7600193
1192	agcaggaagcacuaugggc	HIV	16959541	4
PAT287	cccaaaaaauucgaaguaa	Metapneumovirus	US 2010/0254945 A1	4
PAT387	gcacguaaacagguauaau	Metapneumovirus	US 2010/0254945 A1	4.5
PAT21	auacgguuugaaaagaggg	Influenza	WO 2007/053696 A2	5
virsi1240	augcccugaacaccuucac	West Nile Virus [WNV]	21423625	5
AL-DP-8066	aguaagaccauuuaaaagu	HPV	US20110230546A1	5.87
PAT13	cccccucaaagccgagauc	Influenza	WO 2007/053696 A2	6
A18570	augccggaagaggagacaa	Ebola Zaire virus	US 7759320	6.1
AD-14835	cuuuacuuuuaggguugua	JCV	US08058257	6.64
virsi1818	cagucagcguggcacacca	Human Coxsackievirus [CV]	18691577	7
PAT462	acauuugauaacaaugaag	RSV	EP1833490A2	7
PAT463	uuugauaacaaugaagaag	RSV	EP1833490A2	7
ND-8928	uuaccacaguuaugcacag	HPV	US20110230546A1	7.76
1170	auuuucggguuuauuacag	HIV	16959541	8
PAT345	ggcuauacagauaccauau	Metapneumovirus	US 2010/0254945 A1	8.7
virsi2040	uaccaacacaugcugaccc	Human Rhinovirus	14670593	9
virsi1248	cgauuggauggaugcuagg	West Nile Virus [WNV]	21423625	9
virsi1886	ggaagaggaaacaggagau	Epstein-Barr Virus [EBV]	17108049	10
PAT68	gaaaaggcaacgaacccga	Influenza	WO 2007/053696 A2	10
11	cuaaacauacugauuacaa	RSV	US20100254945A1	10.050993
AD-14937	cuuuauugcaaggaauggc	JCV	US08058257	10.75
1621	ccuaccaccuguaguagca	HIV	17592732	11
57	gcuuaaaagaaagcaacaa	RSV	US20100254945A1	11.389957
1154	uaaaagaaaaggggggauu	HIV	16959541	12
A18656	caugucagugauuauuaua	Ebola Zaire virus	US 7759320	12.2
111	gcaauuggcucaugccuuu	RSV	US20100254945A1	12.761056
PAT77	gacuuugugcgacaaugcu	Influenza	WO 2007/053696 A2	13
A18622	ggcugaaaacugcuacaau	Ebola Zaire virus	US 7759320	13.4
PAT137	gucaggcccccucaaagcc	Influenza	WO 2007/053696 A2	14
PAT348	ggguaggucccuggauaaa	Metapneumovirus	US 2010/0254945 A1	14.4
1550	ucucuagcaguggcgcccg	HIV	16840344	15
virsi2340	gcauuugacuacacagguu	Human Coxsackievirus [CV]	20739472	15
PAT480	cuauagaaauaagugaugu	RSV	EP1833490A2	15
A18554	aagcaacuccaacaauaug	Ebola Zaire virus	US 7759320	15.1
PAT153	augaagcaauugaggagug	Influenza	WO 2007/053696 A2	16
ND-8955	auaugacuuugcuuuucgg	HPV	US20110230546A1	16.62
PAT204	ucuuauuucuucggagaca	Influenza	WO 2007/053696 A2	17
1157	aagaaaaggggggauuggg	HIV	16959541	18
PAT9	ucuaaccgaggucgaaacg	Influenza	WO 2007/053696 A2	18
PAT90	gaaacguacguucucucua	Influenza	WO 2007/053696 A2	19
New_32	accagaauacgacuuggag	HCV	WO 2006/129961 A1	20
virsi1066	guccucuaauuccaggauc	Hepatitis B Virus [HBV]	16153600	20
virsi1920	cgcaccggggauccuaggc	Lassa Virus	17371814	20
A18572	ugccggaagaggagacaac	Ebola Zaire virus	US 7759320	20.9
ND-9107	gccaaaauagguauguuag	HPV	US20110230546A1	21.62
PAT110	cucaccgugcccagugagc	Influenza	WO 2007/053696 A2	22
AD-14847	ccaaaugugcaaucuggug	JCV	US08058257	22.11
virsi1071	uccucacaauaccgcagag	Hepatitis B Virus [HBV]	15756649	23
virsi1573	gauaaguugcagcccagug	Influenza B Virus	16856616	23
AD-14909	uugauugcuucagacaaug	JCV	US08058257	23.43
1194	caggaagcacuaugggcgc	HIV	16959541	24
virsi1229	gcucugugacauuggagag	West Nile Virus [WNV]	21423625	24
AD-14820	auugcugcuggagaggcug	JCV	US08058257	24.59
virsi1563	gaucugcguccaucuagag	Influenza B Virus	16856616	25
140	ccuuauuaucuauagaaaa	RSV	US20100254945A1	25.775306
1165	aaauucaaaauuuucgggu	HIV	16959541	26
1174	uggaaaggugaaggggcag	HIV	16959541	26
13	cagagauagggauacaaua	RSV	US20100254945A1	26.085092
PAT85	gauggauucgaaccgaacg	Influenza	WO 2007/053696 A2	27
7	cacaauaaaaagagaugua	RSV	US20100254945A1	27.773825
virsi1688	guucggaugguucgggaac	Measles Virus	18634829	28
20	guacaacagauuuuaagaa	RSV	US20100254945A1	28.955381
AL-DP-7807	augcuguaugugauaaaug	HPV	US20110230546A1	29.06
New_14	ccaaagugccguacuucgu	HCV	WO 2006/129961 A1	30
New_7	cguauccggaguguaccau	HCV	WO 2006/129961 A1	30
virsi1919	uuaauagacaaugaccacg	Herpes Simplex Virus [HSV]	19397793	30
virsi1723	gcaaagacaucuggacaaa	Human Papillomavirus [HPV]	16681752	30
AD-14853	cucaaauuuuauauaagaa	JCV	US08058257	30.56
AL-DP-8069	aauuaguaagaccauuuaa	HPV	US20110230546A1	31.86
1180	ggugaaggggcaguaguaa	HIV	16959541	32
55	gcagaaaguuaugccagaa	RSV	US20100254945A1	32.163218
AD-14832	aagaaacuacuugggcaau	JCV	US08058257	32.93
virsi1841	gagagugaguauuacccca	Human Coxsackievirus [CV]	20214933	33
AL-DP-7803	uguguacugcaagcaacag	HPV	US20110230546A1	33.28
virsi2295	cgaggauaauauuggcaaa	Hazara Nairovirus	21600011	34
PAT400	gccaugucacggagaaaua	Metapneumovirus	US 2010/0254945 A1	34.4
AD-14942	cuggacauggaucaagcac	JCV	US08058257	34.89
New_20	agccggccaucauucccga	HCV	WO 2006/129961 A1	35
virsi2042	gauggcuuggaagcuuugg	Human Rhinovirus	14670593	35
virsi1552	gugagacuugacaaugcca	Influenza B Virus	16856616	35
AD-14924	uugugcaguggaaagaaag	JCV	US08058257	35.53
PAT136	cgucaggcccccucaaagc	Influenza	WO 2007/053696 A2	36
ND-9096	uucagaauuaguaagacca	HPV	US20110230546A1	36.47
1019	gagacaccagggauuagau	HIV	12438622	37
183	ccacagaugcaacucaaaa	RSV	US20100254945A1	37.261075
virsi1978	aacuucugaacggucacag	Hepatitis C Virus [HCV]	21073745	38
ND-9063	ucaacguguugcgauuggu	HPV	US20110230546A1	38.13
PAT97	aagacaagaccaauccugu	Influenza	WO 2007/053696 A2	39
A18604	ugagaagcaacuccaacaa	Ebola Zaire virus	US 7759320	39.6
New_29	aggacguccggaaccuauc	HCV	WO 2006/129961 A1	40
virsi1438	ugucaacguccgaccuuga	Hepatitis B Virus [HBV]	16443303	40
AD-14890	ugcuuugauugcuucagac	JCV	US08058257	40.51
PAT210	gcggggagucuucgagcuc	Influenza	WO 2007/053696 A2	41
virsi2350	ucaccugccagucaaacga	Herpes Simplex Virus [HSV]	21331889	42
ND-8971	uucuaaaauuagugaguau	HPV	US20110230546A1	42.25
virsi2094	ccuauauggagaugagcaa	Human Metapneumovirus	18839783	43
AD-14781	uaggccuuacuccugaaac	JCV	US08058257	43.01
virsi1782	ucuggucguguuaaugacu	Enterovirus [EV]	16083932	44
PAT207	auuucuucggagacaaugc	Influenza	WO 2007/053696 A2	44
ND-8958	uuuucgggauuuaugcaua	HPV	US20110230546A1	44.33
virsi1897	uuuggagcugaugccguag	Herpes Simplex Virus [HSV]	16306938	45
AD-14751	auaagaggaggaguagaag	JCV	US08058257	45.56
AD-14752	acuguaacaccugcucuug	JCV	US08058257	46.12
AL-DP-7781	auuuguuaauuagguguau	HPV	US20110230546A1	46.42
AL-DP-8061	cauuauaaacgagcagaaa	HPV	US20110230546A1	47.83
PAT152	uaugaagcaauugaggagu	Influenza	WO 2007/053696 A2	48
ND-9106	guuacagguagaagggcgc	HPV	US20110230546A1	48.58
1622	guagacuguagcccaggaa	HIV	17592732	49
AL-DP-8078	ugaaguggaaacucagcag	HPV	US20110230546A1	49.07
ND-8917	acuuugcuuuucgggauuu	HPV	US20110230546A1	49.64
virsi1961	auccagauugggacuucaa	Hepatitis B Virus [HBV]	20642484	50
virsi1744	gcacagagcugcaaacaac	Human Papillomavirus [HPV]	18755502	50
virsi1518	cggcuacauugagggcaag	Influenza A Virus	12594334	50
virsi1923	cgcaccgaggauccuaggc	Lassa Virus	17371814	50
virsi1361	ccuccagaugaggaagaag	SARS Coronavirus	14645307	50
198	gggaaaugcagagauaaaa	RSV	US20100254945A1	50.440774
virsi1050	ccucugcacgucgcaugga	Hepatitis B Virus [HBV]	18201553	51
AL-DP-8068	gaauuaguaagaccauuua	HPV	US20110230546A1	51.01
AD-14916	aaaaaagguagaagacccu	JCV	US08058257	51.8
1118	aaggagagagaugggugcg	HIV	16959541	52
AD-14935	cuuaacccaagaagcucuu	JCV	US08058257	52.26
ND-8950	acccacaggagcgacccag	HPV	US20110230546A1	52.81
AD-14910	gacaaagugcugaauaggg	JCV	US08058257	53.5
1138	uggaaaccaaaaaugauag	HIV	16959541	54
AD-14828	aauggauguugccuuuacu	JCV	US08058257	54.01
AL-DP-8052	auuauaaacgagcagaaaa	HPV	US20110230546A1	54.54
virsi1205	ugaaagguccgugagccgc	Hepatitis C Virus [HCV]	17305886	55
AL-DP-8054	ugugugucaggacaaaaua	HPV	US20110230546A1	55
virsi2063	cuaugcauaccguuccugu	Reovirus	16940517	55
virsi2292	cgagcauaaggguacaaua	Hazara Nairovirus	21600011	56
AD-14790	uuuguguuuucagguucau	JCV	US08058257	56.39
ND-8941	auuagugaguauagacauu	HPV	US20110230546A1	56.87
virsi1569	gucaucagaccagcaaccc	Influenza B Virus	16856616	57
AD-14783	ugcugccacaggauuuuca	JCV	US08058257	57.37
ND-9076	agccuccaaaauugcguag	HPV	US20110230546A1	57.94
virsi1692	agacaucuuagacgugcua	Human Papillomavirus [HPV]	19887612	58
AD-14755	augcuuccuuguuacagug	JCV	US08058257	58.2
AD-14946	aagugggaugaagaccugu	JCV	US08058257	58.75
AD-14742	cuuauaagaggaggaguag	JCV	US08058257	59.15
ND-9069	auagaugugauaggguaga	HPV	US20110230546A1	59.39
virsi1988	ggcaaagccauccccauug	Hepatitis C Virus [HCV]	20863235	60
virsi1719	acccuacaagcuaccugau	Human Papillomavirus [HPV]	16865269	60
virsi1362	gguguuuccauuccaugug	SARS Coronavirus	14645307	60
AD-14758	cgggacuguaacaccugcu	JCV	US08058257	60.21
AD-14801	uaguaaaaccuggagugga	JCV	US08058257	60.85
virsi1979	uuuggguaaagucaucgau	Hepatitis C Virus [HCV]	21073745	61
70	ggacacuuaucaaggcauu	RSV	US20100254945A1	61.215941
virsi1196	uccaucuuagcccuaguca	Hepatitis C Virus [HCV]	17305886	62
ND-9099	gaagaggguacgggaugua	HPV	US20110230546A1	62.39
AD-14886	ugaauagggaggaauccau	JCV	US08058257	62.77
1137	auggaaaccaaaaaugaua	HIV	16959541	63
ND-8907	gguggaccggucgauguau	HPV	US20110230546A1	63.06
AD-14941	aagcucaaauuuuauauaa	JCV	US08058257	63.6
AD-14855	cugauuuugguacauggaa	JCV	US08058257	63.96
virsi1791	gacuaaggaccuaacaaag	Human Coxsackievirus [CV]	15681418	64
virsi1586	gagagacaauuagacuggu	Influenza B Virus	16856616	64
AD-14806	guugcuacuguuucugagg	JCV	US08058257	64.38
AD-14753	ggacaugcuuccuuguuac	JCV	US08058257	64.76
virsi2059	gaugucacgguaaagagca	Hepatitis Delta Virus [HDV]	12915586	65
PAT84	ggauggauucgaaccgaac	Influenza	WO 2007/053696 A2	65
AL-DP-8059	agcggguauggcaauacug	HPV	US20110230546A1	65.03
ND-9068	caacguguugcgauuggug	HPV	US20110230546A1	65.5
AD-14908	auugcuucagacaaugguu	JCV	US08058257	65.92
PAT205	cuuauuucuucggagacaa	Influenza	WO 2007/053696 A2	66
AD-14923	cagggaaauucccuuguuu	JCV	US08058257	66.23
ND-9122	cugcaagggucuguaauau	HPV	US20110230546A1	66.76
virsi1095	gcugugccuuggguggcuu	Hepatitis B Virus [HBV]	14512871	67
virsi1748	gcaauuaaaugacagcuca	Human Papillomavirus [HPV]	18755502	67
AD-14898	aguugcucaucagccugau	JCV	US08058257	67.36
PAT360	cgacuaguucucauuuaaa	Metapneumovirus	US 2010/0254945 A1	67.5
AD-14873	cugaauagggaggaaucca	JCV	US08058257	67.86
PAT75	gaaacgggacucuagcaua	Influenza	WO 2007/053696 A2	68
AD-14809	agaggcugcugcuacuaua	JCV	US08058257	68.41
AL-DP-8073	auacugaaguggaaacuca	HPV	US20110230546A1	68.67
AD-14930	guagacagccauaugcagu	JCV	US08058257	69
ND-9062	gagccuccaaaauugcgua	HPV	US20110230546A1	69.33
AD-14863	ucaucagccugauuuuggu	JCV	US08058257	69.54
New_57	gcaaagaagaucuuaaagg	ASFV	20710054	70
virsi2166	gcuuuggcagcuccucauu	Hepatitis C Virus [HCV]	12951263	70
virsi2192	gugggucaucauugacgca	Hepatitis E Virus [HEV]	20105445	70
virsi1323	gaacaaacccaaggaaauu	SARS Coronavirus	17139181	70
ND-9126	agaggguacgggauguaau	HPV	US20110230546A1	70.14
ND-8939	guaugucuuguugcagauc	HPV	US20110230546A1	70.43
AD-14854	acaaagugcugaauaggga	JCV	US08058257	70.88
virsi1122	cgauccauacugcggaacu	Hepatitis B Virus [HBV]	19026173	71
PAT144	cgagagaggcgaagagaca	Influenza	WO 2007/053696 A2	71
ND-9087	cgaaaguauuuggguaguc	HPV	US20110230546A1	71.12
AD-14907	uugcuucagacaaugguuu	JCV	US08058257	71.41
AD-14760	gacuguaacaccugcucuu	JCV	US08058257	71.86
AL-DP-8095	uggcaauacugaaguggaa	HPV	US20110230546A1	72.01
PAT318	gcacuaaucaagugcagua	Metapneumovirus	US 2010/0254945 A1	72.6
virsi1970	caacugagcuugccauacu	Hepatitis C Virus [HCV]	21161551	73
PAT182	cuuacugacagccagacag	Influenza	WO 2007/053696 A2	73
ND-8960	uccauaugcuguaugugau	HPV	US20110230546A1	73.51
ND-9125	agacagcacaugcguuguu	HPV	US20110230546A1	73.78
1161	uacagugcaggggaaagaa	HIV	16959541	74
AD-14915	gguagaagacccuaaagac	JCV	US08058257	74.01
virsi1858	ggaauuugcacggacaggc	Epstein-Barr Virus [EBV]	17507800	75
virsi1968	guucaacucuacuggaugu	Hepatitis C Virus [HCV]	21161551	75
virsi1829	ggaaccgacuacuuugggu	Human Coxsackievirus [CV]	18691577	75
virsi1541	gaauaucgaaaggaacagc	Influenza A Virus	12594334	75
virsi2213	gagacaaugcagaggagua	Influenza A Virus	20060420	75
virsi2173	ucuauugguaggagugaac	Rotavirus	15914838	75
ND-8905	caauacaacaaaccguugu	HPV	US20110230546A1	75.31
ND-8934	ccggucgauguaugucuug	HPV	US20110230546A1	75.68
virsi1255	gacucagucuaccuuagga	Human Coxsackievirus [CV]	18662724	76
virsi1324	ggaggaacuuagauucccu	SARS Coronavirus	17139181	76
158	gcuuauaggacaacaaauu	RSV	US20100254945A1	76.460404
virsi1054	cgaccgaccuugaggcaua	Hepatitis B Virus [HBV]	18201553	77
virsi1567	guagcaaggaugucucccu	Influenza B Virus	16856616	77
AD-14912	aaagaaaaagcucaaauuu	JCV	US08058257	77.73
virsi2011	gguggacuucucucaauuu	Hepatitis B Virus [HBV]	16022904	78
1125	gagaugggugcgagagcgu	HIV	16959541	78
virsi1572	gggcucuaguugaucaagu	Influenza B Virus	16856616	78
33	gcaccagacacaccaauaa	RSV	US20100254945A1	78.288067
virsi1725	cacguagagaaacccagcu	Human Papillomavirus [HPV]	16120770	79
32	gccuucagcaccagacaca	RSV	US20100254945A1	79.378122
ND-8944	caucaagaacacguagaga	HPV	US20110230546A1	79.97
virsi2060	uucagcgaacaagaggcgc	Hepatitis Delta Virus [HDV]	12915586	80
virsi2039	cgcucaguaaggacaccag	Human Rhinovirus	14670593	80
virsi3003	gcaaaaugaggaauugaau	Polio Virus	16157509	80
virsi1004	gcgugaucauccaggucaa	Sendai Virus	18093677	80
ND-8943	ggucgauguaugucuuguu	HPV	US20110230546A1	80.97
virsi1273	guguuguaccagcacuaca	Human Coxsackievirus [CV]	18662724	81
PAT315	ccaagagaaaaacugaaaa	Metapneumovirus	US 2010/0254945 A1	81.8
virsi2195	cucgggaguuauaguuuau	Hepatitis E Virus [HEV]	20105445	82
PAT212	ggggagucuucgagcucuc	Influenza	WO 2007/053696 A2	82
PAT460	gaucccauuauuaauggaa	RSV	EP1833490A2	82
virsi2282	ccugcaugacuacugcuca	Hepatitis B Virus [HBV]	17926641	83
1410	caggcuaauuuuuuaggga	HIV	19384894	83
virsi1507	gauggagagccuuguucuu	SARS Coronavirus	16038478	83
virsi1559	gguuuguauuaguaguuga	Influenza B Virus	16856616	84
virsi1302	gaucuucuggucuaaacga	SARS Coronavirus	17139181	84
virsi1184	guacugccugauagggugc	Hepatitis C Virus [HCV]	12477890	85
virsi1767	aggaggaugaaauagaugg	Human Papillomavirus [HPV]	15665592	85
virsi1940	agguucggaugguucgaga	Measles Virus	18394725	85
virsi1226	caauaugcuaaaacgcggu	St. Louis Encephalitis [SLE]	21423625	85
1605	uccuuggguucuuaggagc	HIV	15894278	85.6
virsi1606	gagugagacgagaaaugca	Influenza B Virus	16856616	86
PAT456	gcaucaauaccagcuuaua	RSV	EP1833490A2	86
virsi1263	gcaucaaccaaugcuagua	Human Coxsackievirus [CV]	18662724	87
virsi2133	cggcaaaggcuauggaaca	Influenza A Virus	20060420	87
PAT450	caugcucaagcagauuauu	RSV	EP1833490A2	87
virsi1043	uccugcugcuaugccucau	Hepatitis B Virus [HBV]	17596868	88
virsi1766	gcauggagauacaccuaca	Human Papillomavirus [HPV]	18060502	88
130	gcaagagccuccauaguaa	RSV	US20100254945A1	88.157521
1400	aggagagagaugggugcga	HIV	19384894	89
virsi1508	cagcccuauguguucauua	SARS Coronavirus	16038478	89
virsi2051	uuccuccuugcugagguuc	Hepatitis Delta Virus [HDV]	12915586	90
1126	agaugggugcgagagcguc	HIV	16959541	90
virsi2036	cucuucagauccgcaaaca	Human Rhinovirus	14670593	90
virsi1687	gguucggaugguucgggaa	Measles Virus	18634829	90
New_48	cgaacacuauuagaauuaa	orthopoxvirus	18572748	90
virsi1358	guacccucuugauugcauc	SARS Coronavirus	14645307	90
virsi2197	agagguccgcaguuauugc	West Nile Virus [WNV]	19135091	90
1633	cugagagacaggcuaauuu	HIV	20949027	91
PAT437	caucaauaccagcuuauag	RSV	EP1833490A2	91
virsi1465	gaccuugaggcauacuuca	Hepatitis B Virus [HBV]	14592428	92
virsi1259	gugucucuugucuauguca	Human Coxsackievirus [CV]	18662724	92
virsi1579	ggauguaauggaagugcua	Influenza B Virus	16856616	92
PAT433	ucaguaguagaccauguga	RSV	EP1833490A2	92
virsi1262	ggaagagaaaggagugucu	Human Coxsackievirus [CV]	18662724	93
virsi1439	cguccgaccuugaggcaua	Hepatitis B Virus [HBV]	16443303	94
PAT150	gagccuauguggauggauu	Influenza	WO 2007/053696 A2	94
A18488	ugaugaagauuaagaaaaa	Ebola Zaire virus	US 7759320	94.5
1005	agcacacaaguagacccug	HIV	12087358	95
PAT159	ucccuggguuuugcuuaau	Influenza	WO 2007/053696 A2	95
1008	agaccagaucugagccugg	HIV	12087358	95.9
virsi1181	ccagaauacgacuuggagc	Hepatitis C Virus [HCV]	15977238	96
PAT202	gaucuuauuucuucggaga	Influenza	WO 2007/053696 A2	96
PAT425	ugaaauacuaggaaugcuu	RSV	EP1833490A2	96
virsi1463	guuauauggaugauguggu	Hepatitis B Virus [HBV]	14592428	97
virsi2062	gguggauguuguagacaug	Reovirus	16940517	97
157	ccagcuuauaggacaacaa	RSV	US20100254945A1	97.084707
PAT158	aucccuggguuuugcuuaa	Influenza	WO 2007/053696 A2	98
PAT416	aagcauuaaugaccaauga	RSV	EP1833490A2	98
virsi1834	guacagggauaaacauuac	Human Coxsackievirus [CV]	18548221	99
virsi1537	ggaucuuauuucuucggag	Influenza A Virus	12594334	99
virsi1060	caaccaguacgggaccaug	Hepatitis B Virus [HBV]	16153600	100
virsi1024	cccgcucaaugcccg/cga	Hepatitis C Virus [HCV]	19173711	100
virsi1658	gcugauucuguaugacaaa	Influenza A Virus	19479060	100
PAT17	agcgaggacugcagcguag	Influenza	WO 2007/053696 A2	-124
PAT195	cgaucgugccuuccuuuga	Influenza	WO 2007/053696 A2	-81
PAT27	aaccgaggucgaaacguac	Influenza	WO 2007/053696 A2	-73
PAT42	gagcgaggacugcagcgua	Influenza	WO 2007/053696 A2	-62
PAT65	ggcaacgaacccgaucgug	Influenza	WO 2007/053696 A2	-55
PAT87	uggauucgaaccgaacggc	Influenza	WO 2007/053696 A2	-52
A18668	aaguuacaagugccugugg	Ebola Zaire virus	US 7759320	-48.8
PAT117	gcccagugagcgaggacug	Influenza	WO 2007/053696 A2	-44
PAT180	uacuuacugacagccagac	Influenza	WO 2007/053696 A2	-40
PAT18	cgaggacugcagcguagac	Influenza	WO 2007/053696 A2	-37
PAT129	cuugauauuguggauucuu	Influenza	WO 2007/053696 A2	-36
PAT53	cagaucgaacggucuaaca	Influenza	WO 2007/053696 A2	-33
A18586	aguaggacacaugauggug	Ebola Zaire virus	US 7759320	-30.9
PAT130	uugauauuguggauucuug	Influenza	WO 2007/053696 A2	-27
A18564	augaagauuaagaaaaagu	Ebola Zaire virus	US 7759320	-24.1
PAT16	acaagaccaauccugucac	Influenza	WO 2007/053696 A2	-22
AL-DP-8053	uguguagacauuauaaacg	HPV	US20110230546A1	-21.92
PAT328	gguauaaucucaauaaauu	Metapneumovirus	US 2010/0254945 A1	-20.6
PAT372	cccaaaacaauuagucuua	Metapneumovirus	US 2010/0254945 A1	-19.9
A18578	aaucaguaggacacaugau	Ebola Zaire virus	US 7759320	-18.3
AD-14830	uugccuuuacuuuuagggu	JCV	US08058257	-17.1
A18644	caaauccaacggcugauga	Ebola Zaire virus	US 7759320	-16.3
A18498	uuaaaaccuucaucauccu	Ebola Zaire virus	US 7759320	-14.2
PAT175	uagcauacuuacugacagc	Influenza	WO 2007/053696 A2	-14
PAT312	gcuacaagaaauagaagua	Metapneumovirus	US 2010/0254945 A1	-12.8
PAT317	cgaaauuaauaauugauuu	Metapneumovirus	US 2010/0254945 A1	-11.8
PAT374	gggaagaugcuuaugccua	Metapneumovirus	US 2010/0254945 A1	-11
PAT295	gcaauuaacaagaacaaau	Metapneumovirus	US 2010/0254945 A1	-10.2
PAT378	gguuauauaggauuuaaaa	Metapneumovirus	US 2010/0254945 A1	-9.8
ND-9114	uuucagaauuaguaagacc	HPV	US20110230546A1	-8.54
PAT118	cccagugagcgaggacugc	Influenza	WO 2007/053696 A2	-8
A18566	aagauuaagaaaaagucca	Ebola Zaire virus	US 7759320	-7.2
A18568	aagauuaauaauuuuccuc	Ebola Zaire virus	US 7759320	-6.8
ND-9100	auaaaucaacguguugcga	HPV	US20110230546A1	-6.18
PAT246	cuaaaggaaucaucaggua	Metapneumovirus	US 2010/0254945 A1	-5.9
1155	aaaagaaaaggggggauug	HIV	16959541	-5
A18556	aaaaccuucaucauccuuu	Ebola Zaire virus	US 7759320	-4.4
PAT279	gcucucagacaaugaggaa	Metapneumovirus	US 2010/0254945 A1	-3.7
PAT316	gcgaaauuaauaauugauu	Metapneumovirus	US 2010/0254945 A1	-2.7
PAT128	acuugauauuguggauucu	Influenza	WO 2007/053696 A2	-1
New_60	aaaacauuuccguaacugc	ASFV	20710054	0
virsi2332	auuagagagcagaucucug	Dengue Virus [DENV]	21795337	0
virsi1851	aaugccuguccuugcaaau	Epstein-Barr Virus [EBV]	15041532	0
New_1	cuacugucuucacgcagaa	HCV	WO 2006/129961 A1	0
virsi1011	ugauauguugaauguuaau	Hepatitis A Virus [HAV]	15120607	0
virsi2047	gggauuuucguccucuauc	Hepatitis Delta Virus [HDV]	12915586	0
1139	ggaaaccaaaaaugauagg	HIV	16959541	0
1677	agacaagcacauuguaaca	HIV	20833635	0
virsi1813	cgguaccuuugugcgccug	Human Coxsackievirus [CV]	18691577	0
virsi2339	ggcugcuuauggugacaau	Human Coxsackievirus [CV]	20739472	0
virsi1746	gacgugagguauaugacuu	Human Papillomavirus [HPV]	18755502	0
PAT185	acugacagccagacagcga	Influenza	WO 2007/053696 A2	0
virsi1531	ugauaacacaguucgaguc	Influenza A Virus	12594334	0
New_40	caaucucgcauacaaguua	orthopoxvirus	18572748	0
New_49	acaaccgcuuagaaauaaa	orthopoxvirus	18572748	0
virsi1490	gaaccgucauggauguuau	West Nile Virus [WNV]	18360908	0
virsi1076	uuccuaugggagugggccu	Hepatitis B Virus [HBV]	15756649	1
PAT484	auucuaccauauauugaac	RSV	EP1833490A2	1
virsi2348	gacgaccugguuacggaaa	Herpes Simplex Virus [HSV]	21331889	2
PAT476	aagugaaauacuaggaaug	RSV	EP1833490A2	2
ND-9109	aaauugcguaguacagcag	HPV	US20110230546A1	2.37
virsi1211	ugacugcagagagugcuga	Hepatitis C Virus [HCV]	17305886	3
PAT474	uaauagguauguuauaugc	RSV	EP1833490A2	3
A18494	gauuaaaaccuucaucauc	Ebola Zaire virus	US 7759320	3.8
1394	gaucugagccugggagcuc	HIV	18996348	4
PAT469	aauuccuagaaucaauaaa	RSV	EP1833490A2	4
A18502	gaugaagauuaagaaaaag	Ebola Zaire virus	US 7759320	4.7
PAT93	ggcuaaagacaagaccaau	Influenza	WO 2007/053696 A2	5
virsi1231	cacaugagauguacugggu	West Nile Virus [WNV]	21423625	5
virsi1072	uaccgcagagucuagacuc	Hepatitis B Virus [HBV]	15756649	6
PAT108	uucacgcucaccgugccca	Influenza	WO 2007/053696 A2	6
PAT265	ccagaucaucuaacaacau	Metapneumovirus	US 2010/0254945 A1	6.3
AD-14914	aaaaaaaagguagaagacc	JCV	US08058257	6.79
virsi2025	ccaacaguagaccugguag	Human Rhinovirus	14670593	7
PAT464	agugaaauacuaggaaugc	RSV	EP1833490A2	7
AD-14819	aaauugcugcuggagaggc	JCV	US08058257	7.1
PAT224	cagcaagagauaacacuuu	Metapneumovirus	US 2010/0254945 A1	7.9
1200	uaaaagaaaaggggggacu	HIV	16959541	8
AD-14802	uuuuuuguuagaauuuuug	JCV	US08058257	8.8
PAT101	aagaccaauccugucaccu	Influenza	WO 2007/053696 A2	9
AD-14793	uuuucagguucaugggugc	JCV	US08058257	9.15
1183	auggaaaacagauggcagg	HIV	16959541	10
PAT111	ucaccgugcccagugagcg	Influenza	WO 2007/053696 A2	10
PAT260	ggcucaucuucaacaggaa	Metapneumovirus	US 2010/0254945 A1	10.3
ND-8961	uauucuaaaauuagugagu	HPV	US20110230546A1	10.87
virsi1735	uuaugcauaguauauagag	Human Papillomavirus [HPV]	20885450	11
152	ggcuaagaagauugcucaa	RSV	US20100254945A1	11.688827
PAT11	cgaaacguacguucucucu	Influenza	WO 2007/053696 A2	12
PAT218	ccuaagugaucugucauau	Metapneumovirus	US 2010/0254945 A1	12.2
ND-9115	ugcgauugguguauugcug	HPV	US20110230546A1	12.84
virsi1581	ggaaucaagaauaaagacu	Influenza B Virus	16856616	13
192	ggaaguaagauuauagaau	RSV	US20100254945A1	13.573591
PAT162	ucuugguucaacuccuucc	Influenza	WO 2007/053696 A2	14
ND-8942	aagauuccauaauauaagg	HPV	US20110230546A1	14.66
1171	cucuggaaaggugaagggg	HIV	16959541	15
virsi1749	guacaaagcacacacguag	Human Papillomavirus [HPV]	18755502	15
PAT481	uuaugcaguuuaauauuua	RSV	EP1833490A2	15
50	gaucaucuaacaacauaau	RSV	US20100254945A1	15.38642
PAT106	caauccugucaccucugac	Influenza	WO 2007/053696 A2	16
AD-14794	uuucagguucaugggugcc	JCV	US08058257	16.63
40	ggagucuauucauugagua	RSV	US20100254945A1	17.183818
1557	cauaauguuugggccacac	HIV	17173982	18
AD-14846	cuccucaauggauguugcc	JCV	US08058257	18.28
AD-14875	ugacuuaacccaagaagcu	JCV	US08058257	19.19
New_5	ggucaucgauacccucacg	HCV	WO 2006/129961 A1	20
virsi1058	uaccuaugggagugggccu	Hepatitis B Virus [HBV]	16153600	20
virsi1351	aucuguucucuaaacgaac	SARS Coronavirus	15652970	20
AD-14879	aucagccugauuuugguac	JCV	US08058257	20.97
virsi1013	uagagguggaacuuacuau	Hepatitis A Virus [HAV]	15120607	22
PAT163	cuugguucaacuccuuccu	Influenza	WO 2007/053696 A2	22
ND-8953	ugugugauuuguuaauuag	HPV	US20110230546A1	22.36
1162	acagugcaggggaaagaau	HIV	16959541	23
virsi1305	guaaaaccaacgguuuacg	SARS Coronavirus	17139181	23
ND-9073	acuuagugauauuagugga	HPV	US20110230546A1	23.72
PAT91	aacguacguucucucuauc	Influenza	WO 2007/053696 A2	24
ND-8949	uuucgggauuuaugcauag	HPV	US20110230546A1	24.01
New_17	ugacgggcuuuaccggcga	HCV	WO 2006/129961 A1	25
virsi1242	uguuuggaaaggggagcau	West Nile Virus [WNV]	21423625	25
ND-8910	auacaacaaaccguugugu	HPV	US20110230546A1	25.82
1127	aauaaaauaguaagaaugu	HIV	16959541	26
virsi2028	aggaugcaacggcuauaga	Human Rhinovirus	14670593	26
AD-14919	auuuugguacauggaauag	JCV	US08058257	26.34
A18614	aagugaugaagauuaagaa	Ebola Zaire virus	US 7759320	27.3
virsi1826	ccagagggcagugugucgu	Human Coxsackievirus [CV]	18691577	28
AL-DP-8071	uuaguaagaccauuuaaaa	HPV	US20110230546A1	28.24
virsi2293	gaugaaaguugcuccuaua	Hazara Nairovirus	21600011	29
AD-14754	acaugcuuccuuguuacag	JCV	US08058257	29.61
New_15	gguugcugggggucauuau	HCV	WO 2006/129961 A1	30
New_8	cgcaagcauuguguaugag	HCV	WO 2006/129961 A1	30
1149	aauuuuaaaagaaaagggg	HIV	16959541	30
virsi1582	gaauguuggugacccaacu	Influenza B Virus	16856616	30
82	gcaauaucauuggaccuaa	RSV	US20100254945A1	30.963367
120	ggacuaggauuuagaagua	RSV	US20100254945A1	31.88563
PAT73	auggggaugaucggaauau	Influenza	WO 2007/053696 A2	32
PAT366	gcauaggaaguuuagguau	Metapneumovirus	US 2010/0254945 A1	32.3
AD-14784	ccacaggauuuucaguagc	JCV	US08058257	32.94
PAT96	aaagacaagaccaauccug	Influenza	WO 2007/053696 A2	33
A18584	caguaggacacaugauggu	Ebola Zaire virus	US 7759320	33.4
virsi1246	guuuggaaaggggagcauu	West Nile Virus [WNV]	21423625	34
123	gcauuuauacuaagaauua	RSV	US20100254945A1	34.490664
AD-14815	agaaguugaaauugcaucc	JCV	US08058257	34.96
New_24	ccuacucccugcuauccuc	HCV	WO 2006/129961 A1	35
PAT164	aaacgggacucuagcauac	Influenza	WO 2007/053696 A2	35
virsi1685	cagguucggaugguucggg	Measles Virus	18634829	35
134	ggugaaacauauauaucaa	RSV	US20100254945A1	35.864802
PAT169	ggacucuagcauacuuacu	Influenza	WO 2007/053696 A2	36
182	ggaugaucuugaucaccau	RSV	US20100254945A1	36.470271
1150	auuuuaaaagaaaaggggg	HIV	16959541	37
PAT235	gaaagaguacaacagauuu	Metapneumovirus	US 2010/0254945 A1	37.3
1187	ccuauggcaggaagaagcg	HIV	16959541	38
AD-14899	aagggcguggaggcuuuuu	JCV	US08058257	38.29
AL-DP-8050	uuauaaacgagcagaaaaa	HPV	US20110230546A1	39.4
A18600	gcugagaagcaacuccaac	Ebola Zaire virus	US 7759320	39.7
New_33	ggaugauccugaugacuca	HCV	WO 2006/129961 A1	40
1168	caaaauuuucggguuuauu	HIV	16959541	40
AL-DP-7780	gauuuguuaauuaggugua	HPV	US20110230546A1	40.57
A18602	cugagaagcaacuccaaca	Ebola Zaire virus	US 7759320	41.2
virsi1950	gcugauucggagcuaagaa	Measles Virus	18394725	42
AD-14877	gaagacccuaaagacuuuc	JCV	US08058257	42.62
PAT178	cauacuuacugacagccag	Influenza	WO 2007/053696 A2	43
AD-14905	gacuuaacccaagaagcuc	JCV	US08058257	43.02
virsi1087	ucuucucgaggacugggga	Hepatitis B Virus [HBV]	15754419	44
PAT67	gcaacgaacccgaucgugc	Influenza	WO 2007/053696 A2	44
AD-14811	uuuuuuguguuuucagguu	JCV	US08058257	44.73
1176	gaaaggugaaggggcagua	HIV	16959541	45
virsi1045	auugcaccuguauucccau	Hepatitis B Virus [HBV]	17054586	46
ND-8966	aauuagugaguauagacau	HPV	US20110230546A1	46.14
18	cagaaagaguacaacagau	RSV	US20100254945A1	46.984248
ND-8972	augcauaguauauagagau	HPV	US20110230546A1	47.9
virsi1494	caaccuauggcgucuguuc	West Nile Virus [WNV]	15747251	48
AL-DP-8075	uacugaaguggaaacucag	HPV	US20110230546A1	48.65
virsi2038	aucacucacucuuggcacc	Human Rhinovirus	14670593	49
AD-14765	ugcaucccuugcuacugua	JCV	US08058257	49.16
New_11	ggcaacugguuuggcugua	HCV	WO 2006/129961 A1	50
virsi1962	gacucucagcaaugucaac	Hepatitis B Virus [HBV]	21107751	50
virsi2029	gagaaacaaccuagugaug	Human Rhinovirus	14670593	50
virsi1529	cggcuucgccgagaucaga	Influenza A Virus	12594334	50
New_53	acagaaauauguuaacaau	orthopoxvirus	18572748	50
virsi1350	agccaaccaaccucgaucu	SARS Coronavirus	15652970	50
ND-9129	uuguacauuugaauuauca	HPV	US20110230546A1	50.59
1186	uccuauggcaggaagaagc	HIV	16959541	51
AD-14944	ugugcaguggaaagaaagg	JCV	US08058257	51.02
ND-8965	accaaaagagaacugcaau	HPV	US20110230546A1	51.97
PAT166	acgggacucuagcauacuu	Influenza	WO 2007/053696 A2	52
ND-9093	uagacauuauaaacgagca	HPV	US20110230546A1	52.38
virsi1722	accguugugugauuuguua	Human Papillomavirus [HPV]	16681752	53
AD-14849	agaucugcuccucaaugga	JCV	US08058257	53.59
1141	uuggaggaaaugaacaagu	HIV	16959541	54
AL-DP-8057	gacagcggguauggcaaua	HPV	US20110230546A1	54.11
ND-9088	cuccaaaauugcguaguac	HPV	US20110230546A1	54.65
virsi1969	cauccccugcugcauucaa	Hepatitis C Virus [HCV]	21161551	55
virsi1825	ccugaaugcggcuaauccu	Human Coxsackievirus [CV]	18691577	55
virsi1238	aaaggggagcauugacaca	West Nile Virus [WNV]	21423625	55
virsi1349	cguaacuaaacagcacaag	SARS Coronavirus	15652970	56
ND-8902	gucgguggaccggucgaug	HPV	US20110230546A1	56.54
ND-8946	acaguuacugcgacgugag	HPV	US20110230546A1	56.88
virsi2302	uugcagagaucugaauucc	Junin Virus	19591878	57
ND-8919	augacuuugcuuuucggga	HPV	US20110230546A1	57.49
93	cguaaagcuccaugcaaau	RSV	US20100254945A1	57.970946
virsi1691	cgcgguucauaaagcuaaa	Human Papillomavirus [HPV]	19887612	58
ND-9090	uaaugacauaguagacgau	HPV	US20110230546A1	58.24
AD-14917	aaaaagguagaagacccua	JCV	US08058257	58.97
PAT361	gguaggaucaagcacucaa	Metapneumovirus	US 2010/0254945 A1	59.2
AD-14829	ccucaauggauguugccuu	JCV	US08058257	59.46
virsi1967	uggcuugggauaugaugau	Hepatitis C Virus [HCV]	21161551	60
virsi1764	ccguugugugauuuguuaa	Human Papillomavirus [HPV]	17575104	60
virsi1342	cuuacauagcucgcgucuc	SARS Coronavirus	15220426	60
ND-9083	acucuuugccaacguuuaa	HPV	US20110230546A1	60.49
AD-14769	gcuacuauagaaguugaaa	JCV	US08058257	60.93
virsi1279	gcacuacagcauacaucgu	Human Coxsackievirus [CV]	18662724	61
AD-14787	gcugcugccacaggauuuu	JCV	US08058257	61.23
virsi1492	ugacaaacgugcugaccca	West Nile Virus [WNV]	15747251	62
PAT244	gacaaagaggcaagaaaaa	Metapneumovirus	US 2010/0254945 A1	62.4
ND-8921	uuacugcgacgugagguau	HPV	US20110230546A1	62.83
1391	gaggggaccagggagagca	HIV	18510865	63
PAT306	gcaucaucaucauaaucaa	Metapneumovirus	US 2010/0254945 A1	63.2
PAT264	gccagaucaucuaacaaca	Metapneumovirus	US 2010/0254945 A1	63.6
AD-14839	caauggauguugccuuuac	JCV	US08058257	63.97
virsi1281	gacguucaguguaaugcaa	Human Coxsackievirus [CV]	18662724	64
virsi1432	auguggaauuggacgcguu	Reovirus	16940517	64
AD-14791	guguuuucagguucauggg	JCV	US08058257	64.45
AD-14936	auugugcaguggaaagaaa	JCV	US08058257	64.79
virsi2053	uucuuucccuucucucguc	Hepatitis Delta Virus [HDV]	12915586	65
virsi1561	gaucuguuuagcauaccau	Influenza B Virus	16856616	65
AD-14842	gauguugccuuuacuuuua	JCV	US08058257	65.17
AL-DP-8049	cggguauggcaauacugaa	HPV	US20110230546A1	65.69
AD-14882	uagaagacccuaaagacuu	JCV	US08058257	65.99
virsi1554	gacacuaggauguuccaag	Influenza B Virus	16856616	66
AL-DP-8048	gcggguauggcaauacuga	HPV	US20110230546A1	66.3
AD-14864	guagaagacccuaaagacu	JCV	US08058257	66.82
virsi1676	ucucgggaaucucaauguu	Hepatitis B Virus [HBV]	18685862	67
PAT148	uagagccuauguggaugga	Influenza	WO 2007/053696 A2	67
ND-8969	agagaugggaauccauaug	HPV	US20110230546A1	67.38
AD-14779	gaccuaguugcuacuguuu	JCV	US08058257	67.54
6	gagucucaauacacaauaa	RSV	US20100254945A1	67.907131
virsi2307	gucgaguucauucgguaug	Yellow Fever Virus	19169857	68
AD-14901	gacccuaaagacuuuccug	JCV	US08058257	68.53
ND-8899	ucgguggaccggucgaugu	HPV	US20110230546A1	68.71
AD-14796	uugcaucccuugcuacugu	JCV	US08058257	69.02
AD-14759	ggacuguaacaccugcucu	JCV	US08058257	69.38
AD-14808	gagaggcugcugcuacuau	JCV	US08058257	69.71
New_66	gcagguaaacaagauauua	ASFV	20710054	70
virsi1976	accucaaagaaaaaccaaa	Hepatitis C Virus [HCV]	21073745	70
virsi1892	gguacaacaucaucaacuu	Herpes Simplex Virus [HSV]	17979991	70
virsi2196	uuauggcaauggagucaua	West Nile Virus [WNV]	19135091	70
ND-9105	agauuauuugaaagcgaag	HPV	US20110230546A1	70.29
AD-14814	gccuuacuccugaaacaua	JCV	US08058257	70.46
ND-9074	gagauuauuugaaagcgaa	HPV	US20110230546A1	70.89
virsi1903	cugcaccaugaucaucgac	Herpes Simplex Virus [HSV]	18551244	71
virsi1568	gaaauguagaguggcagcu	Influenza B Virus	16856616	71
AD-14818	cagguucaugggugccgca	JCV	US08058257	71.12
ND-8963	gucuuguugcagaucauca	HPV	US20110230546A1	71.61
virsi1041	ggcucaguuuacuagugcc	Hepatitis B Virus [HBV]	17596868	72
AD-14786	aguugaaauugcaucccuu	JCV	US08058257	72.26
AD-14926	guacauggaauaguucaga	JCV	US08058257	72.71
1102	gggugcgagagcgucaaua	HIV	16706616	73
virsi1486	gaacaaacaaacagcgaug	West Nile Virus [WNV]	18360908	73
AD-14939	gugauuuuccuccuaauuc	JCV	US08058257	73.55
105	gcuuacuuaaguuaguaaa	RSV	US20100254945A1	73.85939
1375	agaaggaugucaacaaaua	HIV	18199654	74
ND-9079	guacaaugggccuacgaua	HPV	US20110230546A1	74.21
virsi1010	gguugaaguuaaaccugcu	Hepatitis A Virus [HAV]	15120607	75
virsi2055	agagcauuggaacgucgga	Hepatitis Delta Virus [HDV]	12915586	75
virsi1842	gcugugcucgccauuaaca	Human Coxsackievirus [CV]	20214933	75
virsi1514	gcaggcaaaccauuugaau	Influenza A Virus	12594334	75
virsi2212	ggugaaaggaguuggaaca	Influenza A Virus	20060420	75
virsi1228	cggcauacagcuucaacug	St. Louis Encephalitis [SLE]	21423625	75
AD-14746	ccuguugaauguuggguuc	JCV	US08058257	75.48
ND-8906	gcugcaaacaacuauacau	HPV	US20110230546A1	75.77
virsi1260	gcaaccuuggucaucaaca	Human Coxsackievirus [CV]	18662724	76
virsi1491	gcugcgugacuaucauguc	West Nile Virus [WNV]	15747251	76
ND-9066	ccuccaaaauugcguagua	HPV	US20110230546A1	76.49
virsi1980	gacgggauaaauuucgcaa	Hepatitis C Virus [HCV]	21073745	77
AD-14780	ggauuacaaguaccucuga	JCV	US08058257	77.04
ND-8904	caacaguuacugcgacgug	HPV	US20110230546A1	77.89
virsi1052	ccgugaacgcccaccgaau	Hepatitis B Virus [HBV]	18201553	78
1143	uagcaggaagauggccagu	HIV	16959541	78
virsi1334	ugcuugcugcugucuacag	SARS Coronavirus	16638566	78
AD-14895	auuuuccuccuaauucuga	JCV	US08058257	78.32
virsi1609	gaaguacucucugacaaca	Influenza B Virus	16856616	79
AD-14903	ugugauuuuccuccuaauu	JCV	US08058257	79.45
New_58	ccucagucgguccuuguau	ASFV	20710054	80
virsi1914	guaucuggcuggucaauuu	Herpes Simplex Virus [HSV]	16140767	80
PAT89	uaacaauagagagaauggu	Influenza	WO 2007/053696 A2	80
virsi1434	gucagcucaaucauguagc	Reovirus	16940517	80
ND-8914	caagcaacaguuacugcga	HPV	US20110230546A1	80.09
virsi1123	ccauacugcggaacuccua	Hepatitis B Virus [HBV]	19026173	81
PAT206	uuauuucuucggagacaau	Influenza	WO 2007/053696 A2	81
virsi1042	uagagucuccggaacauug	Hepatitis B Virus [HBV]	17596868	82
virsi1902	uuggaauugauugcgaaag	Herpes Simplex Virus [HSV]	16306938	82
virsi2129	gaaaggaguuggaacaaua	Influenza A Virus	20060420	82
PAT357	gcuaucaauggugaagaua	Metapneumovirus	US 2010/0254945 A1	82.1
virsi1006	gaauccucacaauaccgca	Hepatitis B Virus [HBV]	18378325	83
virsi1268	ggaugaagaagcaauggaa	Human Coxsackievirus [CV]	18662724	83
virsi1227	cugugacauuggagaguca	St. Louis Encephalitis [SLE]	21423625	83
virsi1483	acgccuauccaugacgcaa	Japanese Encephalitis Virus [JE]	16791421	84
45	gaagcaaagcagaaaguuu	RSV	US20100254945A1	84.08477
virsi1179	cauuguggacgugcaguac	Hepatitis C Virus [HCV]	15977238	85
virsi1731	ggaagaaaacgaugaaaua	Human Papillomavirus [HPV]	15908516	85
virsi1948	ggagcuuagcauuguucaa	Measles Virus	18394725	85
virsi1225	ugcucugugacauuggaga	St. Louis Encephalitis [SLE]	21423625	85
virsi2289	cgaugaugcgccaaagaga	Hazara Nairovirus	21600011	86
virsi1557	gcaacggcacuaaacacaa	Influenza B Virus	16856616	86
PAT454	uccacuacuagagcauaug	RSV	EP1833490A2	86
virsi1266	ggaugaacaacuacaugca	Human Coxsackievirus [CV]	18662724	87
virsi1560	ggaucagcaugacaguaac	Influenza B Virus	16856616	87
virsi1509	cucacucgugagcucaaug	SARS Coronavirus	16038478	87
virsi2285	ugacucuagcuaccugggu	Hepatitis B Virus [HBV]	17926641	88
PAT190	cagccagacagcgaccaaa	Influenza	WO 2007/053696 A2	88
PAT280	gcagaguccucaaucuuaa	Metapneumovirus	US 2010/0254945 A1	88.4
virsi1264	ggaaaggacaugucucuau	Human Coxsackievirus [CV]	18662724	89
87	gcacaggaagacacccuau	RSV	US20100254945A1	89.162949
virsi2049	uuguucucgagggccuucc	Hepatitis Delta Virus [HDV]	12915586	90
1620	ggcccaagaagaacaugag	HIV	17592732	90
virsi2209	ggaccaaacuuauacaaua	Influenza A Virus	20060420	90
New_83	cagccuuguuuctagcagc	MV	22052457	90
PAT439	aguccacuacuagagcaua	RSV	EP1833490A2	90
virsi1288	gagacauaucuaaugugcc	SARS Coronavirus	14988013	90
1	cuucaagggauucaccuaa	RSV	US20100254945A1	90.520306
virsi1817	acacaccgaucaacaguca	Human Coxsackievirus [CV]	18691577	91
PAT436	gcaaauucaaucaagcauu	RSV	EP1833490A2	91
1664	cggauccuuagcacuuauc	HIV	12186906	92
virsi1815	ccaacuguaacuuagaagu	Human Coxsackievirus [CV]	18691577	92
virsi1556	guccuaacuauaugcggca	Influenza B Virus	16856616	92
PAT338	gggaaagaaagagaauuaa	Metapneumovirus	US 2010/0254945 A1	92.4
virsi2031	ggacugcaaacacuaccuu	Human Rhinovirus	14670593	93
1022	uauggcaggaagaagcgga	HIV	12438622	94
PAT428	aaagugcacaacauuauac	RSV	EP1833490A2	94
PAT333	gguauguuaacuaauaaau	Metapneumovirus	US 2010/0254945 A1	94.5
1024	gaagcggagacagcgacga	HIV	12438622	95
virsi1639	ugggagugcagaugcagcg	Influenza A Virus	17719657	95
1006	cuuggcacuagcagcauua	HIV	12087358	95.9
1026	ugagacaccagggauuaga	HIV	12438622	96
PAT423	gcauuaaauagccuuaaau	RSV	EP1833490A2	96
150	gcacucaagagaaaaaauu	RSV	US20100254945A1	96.268955
1031	cugcuuguaccaauugcua	HIV	14557638	97
PAT421	caugugaauucccugcauc	RSV	EP1833490A2	97
virsi1460	cauggagagcacaacauca	Hepatitis B Virus [HBV]	14592428	98
virsi1516	gaucuguuccaccauugaa	Influenza A Virus	12594334	98
PAT418	auugagauagaaucuagaa	RSV	EP1833490A2	98
PAT156	aagcaauugaggagugccu	Influenza	WO 2007/053696 A2	99
virsi1540	uggcuggaucgagugagca	Influenza A Virus	12594334	99
virsi1062	ccuccaaucacucaccaac	Hepatitis B Virus [HBV]	16153600	100
1597	gugccuggcuagaagcaca	HIV	14963165	100
virsi1289	gggcuaccaccuuaugucc	SARS Coronavirus	14988013	100
PAT79	cuaugggauuccuuucguc	Influenza	WO 2007/053696 A2	-109
PAT78	ucuaugggauuccuuucgu	Influenza	WO 2007/053696 A2	-81
PAT5	cuucuaaccgaggucgaaa	Influenza	WO 2007/053696 A2	-72
PAT44	uuguggauucuugaucguc	Influenza	WO 2007/053696 A2	-60
PAT123	ugagcgaggacugcagcgu	Influenza	WO 2007/053696 A2	-54
PAT56	uucagaucgaacggucuaa	Influenza	WO 2007/053696 A2	-51
A18674	ucugaugcaauuuuugaug	Ebola Zaire virus	US 7759320	-47.6
PAT329	gguguguaguaaaaagcaa	Metapneumovirus	US 2010/0254945 A1	-43.6
PAT131	ugauauuguggauucuuga	Influenza	WO 2007/053696 A2	-40
PAT8	uucuaaccgaggucgaaac	Influenza	WO 2007/053696 A2	-37
PAT33	ggucgaaacguacguucuc	Influenza	WO 2007/053696 A2	-36
PAT37	cacgcucaccgugcccagu	Influenza	WO 2007/053696 A2	-32
A18638	acugcuacaaucuugaaau	Ebola Zaire virus	US 7759320	-29.1
PAT43	uauuguggauucuugaucg	Influenza	WO 2007/053696 A2	-26
PAT12	aaacguacguucucucuau	Influenza	WO 2007/053696 A2	-24
PAT23	acgguuugaaaagagggcc	Influenza	WO 2007/053696 A2	-22
PAT140	aggcccccucaaagccgag	Influenza	WO 2007/053696 A2	-21
1199	uuaaaagaaaaggggggac	HIV	16959541	-20
PAT302	gcugagcaaucaagagaau	Metapneumovirus	US 2010/0254945 A1	-19.5
PAT28	accgaggucgaaacguacg	Influenza	WO 2007/053696 A2	-18
PAT38	acgcucaccgugcccagug	Influenza	WO 2007/053696 A2	-17
PAT188	gacagccagacagcgacca	Influenza	WO 2007/053696 A2	-16
AL-DP-8089	uuuuucucaaggacguggu	HPV	US20110230546A1	-14.08
PAT63	uuugagagagaaggguacu	Influenza	WO 2007/053696 A2	-14
AL-DP-8084	uccuuuuucucaaggacgu	HPV	US20110230546A1	-12.73
PAT322	gggacaaauaacaauggau	Metapneumovirus	US 2010/0254945 A1	-11.8
PAT401	ccucaaaaaaacuagacaa	Metapneumovirus	US 2010/0254945 A1	-10.9
1393	gaccagaucugagccuggg	HIV	18996348	-10
PAT238	gcaaauguuagauauacau	Metapneumovirus	US 2010/0254945 A1	-9
A18672	cagguuuuaucuauuuugg	Ebola Zaire virus	US 7759320	-8.4
AL-DP-8065	auguguagacauuauaaac	HPV	US20110230546A1	-7.74
AL-DP-8067	uaguaagaccauuuaaaag	HPV	US20110230546A1	-7.09
AD-14837	uacuuuuaggguuguacgg	JCV	US08058257	-6.681
PAT339	ccuggcaaacaaagacaaa	Metapneumovirus	US 2010/0254945 A1	-6.1
PAT308	gcauaguuaguuaauuaaa	Metapneumovirus	US 2010/0254945 A1	-5.9
1202	aaagaaaaggggggacugg	HIV	16959541	-5
PAT257	gagucuauucauugaguau	Metapneumovirus	US 2010/0254945 A1	-4.3
A18648	uggaccaaugugaccuagu	Ebola Zaire virus	US 7759320	-3.6
AL-DP-8093	aauccuuuuucucaaggac	HPV	US20110230546A1	-2.59
AL-DP-8062	acguuuaaaugugugucag	HPV	US20110230546A1	-0.52
New_61	augaaaaacuaaugucugc	ASFV	20710054	0
virsi2337	ccagagauccugcugucuc	Dengue Virus [DENV]	21795337	0
virsi1852	agaaggagagcuaggccua	Epstein-Barr Virus [EBV]	15041532	0
New_2	agcgucuagccauggcguu	HCV	WO 2006/129961 A1	0
virsi1079	ucaucucuuguucaugucc	Hepatitis B Virus [HBV]	15756649	0
1593	gccuuaggcaucuccuaug	HIV	14963165	0
1558	ggcugguuuugcgauucua	HIV	17173982	0
virsi2158	cuacuucgaaaaacccagu	Human Coxsackievirus [CV]	17222937	0
virsi1822	cuaguaacaccguggaagu	Human Coxsackievirus [CV]	18691577	0
virsi2341	ugacuacacagguuaugau	Human Coxsackievirus [CV]	20739472	0
virsi1745	ggagcgacccagaaaguua	Human Papillomavirus [HPV]	18755502	0
PAT88	aucuccacaacucgagggg	Influenza	WO 2007/053696 A2	0
virsi1517	ugcuucaauccgaugauug	Influenza A Virus	12594334	0
New_41	gcuagugaguacggauuaa	orthopoxvirus	18572748	0
New_50	agguuauaaccuuaauaua	orthopoxvirus	18572748	0
virsi1239	aaggggagcauugacacau	West Nile Virus [WNV]	21423625	0
virsi1064	gagacagucauccucaggc	Hepatitis B Virus [HBV]	16153600	1
PAT407	cccaauaugaucaagcuua	Metapneumovirus	US 2010/0254945 A1	1.5
1151	uuuuaaaagaaaagggggg	HIV	16959541	2
PAT477	cucuuagcaaagucaaguu	RSV	EP1833490A2	2
173	gggaaguuaacaagaaauu	RSV	US20100254945A1	2.5688896
1193	gcaggaagcacuaugggcg	HIV	16959541	3
virsi1368	gacaaauagcgccaggaca	SARS Coronavirus	15848179	3
A18582	ucaguaggacacaugaugg	Ebola Zaire virus	US 7759320	3.8
virsi2035	gccuagugacauguaugug	Human Rhinovirus	14670593	4
PAT470	auuugauaacaaugaagaa	RSV	EP1833490A2	4
1152	uuuaaaagaaaagggggga	HIV	16959541	5
PAT74	uggggaugaucggaauauu	Influenza	WO 2007/053696 A2	5
PAT245	gcuaaaggaaucaucaggu	Metapneumovirus	US 2010/0254945 A1	5.2
virsi1169	gcgagugccccgggagguc	Hepatitis C Virus [HCV]	16496015	6
virsi1253	ucaauaugcuaaaacgcgg	West Nile Virus [WNV]	21423625	6
ND-8938	aauacaacaaaccguugug	HPV	US20110230546A1	6.51
AL-DP-8046	aacguuuaaauguguguca	HPV	US20110230546A1	6.81
virsi2033	uaccacaucaaaugcagcc	Human Rhinovirus	14670593	7
PAT465	gaagcauuaaugaccaaug	RSV	EP1833490A2	7
AL-DP-8092	gaaauccuuuuucucaagg	HPV	US20110230546A1	7.15
PAT232	gggauacaauauauuugca	Metapneumovirus	US 2010/0254945 A1	7.9
PAT92	uggcuaaagacaagaccaa	Influenza	WO 2007/053696 A2	8
ND-8932	uaauuagguguauuaacug	HPV	US20110230546A1	8.81
PAT107	auccugucaccucugacua	Influenza	WO 2007/053696 A2	9
177	ggacuuaaacccuaagguu	RSV	US20100254945A1	9.2660922
virsi1820	ggagaaagcguucguuauc	Human Coxsackievirus [CV]	18691577	10
virsi1346	uguuguuauacgagcaugu	SARS Coronavirus	15652970	10
A18598	ggugauuuuccguuugaug	Ebola Zaire virus	US 7759320	10.4
A18612	aaagugaugaagauuaaga	Ebola Zaire virus	US 7759320	10.9
PAT105	ccaauccugucaccucuga	Influenza	WO 2007/053696 A2	11
PAT288	ccaaaaaauucgaaguaaa	Metapneumovirus	US 2010/0254945 A1	11.7
PAT62	ggaugucaauccgacuuua	Influenza	WO 2007/053696 A2	12
PAT343	ccuaaguaaauucaaucaa	Metapneumovirus	US 2010/0254945 A1	12.3
A18590	uaggacacaugauggugau	Ebola Zaire virus	US 7759320	13
PAT402	ggauuaagaauaccaauaa	Metapneumovirus	US 2010/0254945 A1	13
AD-14822	uuuuguuagaauuuuugcu	JCV	US08058257	13.61
virsi1301	gaacucuucugaaggaguu	SARS Coronavirus	17139181	14
104	gcaaaaucacacaccaaua	RSV	US20100254945A1	14.67454
1184	uggaaaacagauggcaggu	HIV	16959541	15
PAT3	aggcaccaaacgaucuuau	Influenza	WO 2007/053696 A2	15
virsi1251	aaaacacaacggaaugcga	West Nile Virus [WNV]	21423625	15
46	guuuguuuguaaauauauu	RSV	US20100254945A1	15.597137
PAT479	ugugaauucccugcaucaa	RSV	EP1833490A2	16
A18596	uggugauuuuccguuugau	Ebola Zaire virus	US 7759320	16.7
ND-8962	uauggaacaacauuagaac	HPV	US20110230546A1	17.43
virsi1788	uacagcaaaaugggagcuc	Human Coxsackievirus [CV]	15681418	18
ND-8954	uuaauuagguguauuaacu	HPV	US20110230546A1	18.39
124	gcuaaguguacaagauuuu	RSV	US20100254945A1	19.286327
New_6	ucugcccgguugcuccuuu	HCV	WO 2006/129961 A1	20
1169	aauuuucggguuuauuaca	HIV	16959541	20
AD-14862	uaguaagggcguggaggcu	JCV	US08058257	20.05
virsi1944	cgccgauucauggucgcuc	Measles Virus	18394725	21
virsi1213	acugcagagagugcugaua	Hepatitis C Virus [HCV]	17305886	22
PAT170	gacucuagcauacuuacug	Influenza	WO 2007/053696 A2	22
AD-14940	ugauugcuucagacaaugg	JCV	US08058257	22.5
virsi1830	ggguguccguguuucauuu	Human Coxsackievirus [CV]	18691577	23
AD-14902	aggagcaugacuuuaaccc	JCV	US08058257	23.01
ND-8912	uacaacaaaccguugugug	HPV	US20110230546A1	23.89
PAT94	cuaaagacaagaccaaucc	Influenza	WO 2007/053696 A2	24
PAT231	gauagggauacaauauauu	Metapneumovirus	US 2010/0254945 A1	24.2
New_22	ucggguugcugcaaacagc	HCV	WO 2006/129961 A1	25
94	gcaaauucaaccacaauua	RSV	US20100254945A1	25.189854
26	gguagaagaaauagacaaa	RSV	US20100254945A1	25.888246
1146	cacaauuuuaaaagaaaag	HIV	16959541	26
PAT99	gacaagaccaauccuguca	Influenza	WO 2007/053696 A2	26
27	gaaauagacaaagaggcaa	RSV	US20100254945A1	26.454901
AD-14892	auugcuuugauugcuucag	JCV	US08058257	27.31
PAT2	ggcaccaaacgaucuuaug	Influenza	WO 2007/053696 A2	28
AD-14833	ugccuuuacuuuuaggguu	JCV	US08058257	28.48
PAT189	acagccagacagcgaccaa	Influenza	WO 2007/053696 A2	29
AD-14878	aaaaagcucaaauuuuaua	JCV	US08058257	29.77
New_25	cauuccccauuaacgcgua	HCV	WO 2006/129961 A1	30
virsi1046	agaauuuggagcuacugug	Hepatitis B Virus [HBV]	17054586	30
1128	auaaaauaguaagaaugua	HIV	16959541	30
virsi1489	gcuaaggugcuugagcugc	West Nile Virus [WNV]	18360908	30
virsi1787	guaacacacaccgaucaac	Human Coxsackievirus [CV]	15681418	31
1177	aaaggugaaggggcaguag	HIV	16959541	32
PAT168	gggacucuagcauacuuac	Influenza	WO 2007/053696 A2	32
AD-14761	cuccagaaaugggugaccc	JCV	US08058257	32.58
virsi1092	cuuuuucaccucugccuaa	Hepatitis B Virus [HBV]	15754419	33
PAT209	ggcggggagucuucgagcu	Influenza	WO 2007/053696 A2	33
AL-DP-8051	acaauguguagacauuaua	HPV	US20110230546A1	33.51
AL-DP-7779	ugauuuguuaauuaggugu	HPV	US20110230546A1	34.04
PAT371	ggacaacaaauuaccacuu	Metapneumovirus	US 2010/0254945 A1	34.8
New_62	gaacuuuacaucaauaacc	ASFV	20710054	35
virsi2191	acuaguguucacccaggcg	Hepatitis E Virus [HEV]	20105445	35
PAT165	aacgggacucuagcauacu	Influenza	WO 2007/053696 A2	35
virsi1306	gcguguuaaaaaucugaac	SARS Coronavirus	17139181	35
AD-14816	ugccacaggauuuucagua	JCV	US08058257	35.97
PAT215	ucccgucaggcccccucaa	Influenza	WO 2007/053696 A2	36
AD-14827	gaaacuacuugggcaauag	JCV	US08058257	36.54
PAT124	gcgaggacugcagcguaga	Influenza	WO 2007/053696 A2	37
AL-DP-8072	aauacugaaguggaaacuc	HPV	US20110230546A1	37.75
1392	acuuacucuugauuguaac	HIV	18510865	38
ND-8930	ugcuuuucgggauuuaugc	HPV	US20110230546A1	38.84
31	cagguaacaucccacaaaa	RSV	US20100254945A1	39.464711
A18592	gauggugauuuuccguuug	Ebola Zaire virus	US 7759320	40
New_34	cggggagcuaaacacucca	HCV	WO 2006/129961 A1	40
virsi1656	ggaagaacacagaucuuga	Influenza A Virus	19479060	40
AL-DP-8088	ccuuuuucucaaggacgug	HPV	US20110230546A1	40.71
A18608	agaagcaacuccaacaaua	Ebola Zaire virus	US 7759320	41.5
virsi1487	gacgcagucggaggucacu	West Nile Virus [WNV]	18360908	42
virsi1177	cucguagaccgugcaucau	Hepatitis C Virus [HCV]	16496015	43
PAT95	uaaagacaagaccaauccu	Influenza	WO 2007/053696 A2	43
66	gguauaagagaagaacuaa	RSV	US20100254945A1	43.071128
1144	auucccuacaauccccaaa	HIV	16959541	44
34	caccagacacaccaauaau	RSV	US20100254945A1	44.090947
AD-14749	acacuaacaggaggagaaa	JCV	US08058257	44.84
1129	uagaagaaaugaugacagc	HIV	16959541	45
1188	cuauggcaggaagaagcgg	HIV	16959541	46
ND-8957	caggacccacaggagcgac	HPV	US20110230546A1	46.16
virsi1171	ccccgggaggucucguaga	Hepatitis C Virus [HCV]	16496015	47
PAT171	acucuagcauacuuacuga	Influenza	WO 2007/053696 A2	48
AL-DP-8055	acauuauaaacgagcagaa	HPV	US20110230546A1	48.36
ND-9077	gccuccaaaauugcguagu	HPV	US20110230546A1	48.81
PAT115	gugcccagugagcgaggac	Influenza	WO 2007/053696 A2	49
AD-14857	cucaucagccugauuuugg	JCV	US08058257	49.24
New_16	ggcacaugguaucgacccu	HCV	WO 2006/129961 A1	50
virsi2349	aaugcaucgaagucguaca	Herpes Simplex Virus [HSV]	21331889	50
PAT172	cucuagcauacuuacugac	Influenza	WO 2007/053696 A2	50
virsi1523	uaaggcgaaucuggcgcca	Influenza A Virus	12594334	50
New_54	agguggauucgguaguauu	orthopoxvirus	18572748	50
virsi1247	aauguccuggaucacacag	West Nile Virus [WNV]	21423625	50
AD-14763	gaggcugcugcuacuauag	JCV	US08058257	50.61
1404	gagagaugggugcgagagc	HIV	19384894	51
AD-14785	aaguugaaauugcaucccu	JCV	US08058257	51.1
virsi1116	ucacucaccaaccuccugu	Hepatitis B Virus [HBV]	19026173	52
virsi1943	gccgauucauggucgcucu	Measles Virus	18394725	52
ND-9110	aguauuuggguaguccacu	HPV	US20110230546A1	52.42
PAT69	ucgagcucucggacgaaaa	Influenza	WO 2007/053696 A2	53
virsi1783	aaccagaucacgaacuugg	Enterovirus [EV]	16083932	54
virsi1280	gcaggaagcagcuaacaua	Human Coxsackievirus [CV]	18662724	54
AD-14770	aauugcaucccuugcuacu	JCV	US08058257	54.41
AD-14812	acuauagaaguugaaauug	JCV	US08058257	54.73
virsi2050	cgauagcugcuucuucuug	Hepatitis Delta Virus [HDV]	12915586	55
virsi1695	acauugcuaugagcaauua	Human Papillomavirus [HPV]	19887612	55
virsi1244	uugucaauaugcuaaaacg	West Nile Virus [WNV]	21423625	55
AD-14745	ugcuuccuuguuacagugu	JCV	US08058257	56.03
AD-14945	uugguacauggaauaguuc	JCV	US08058257	56.55
ND-8933	gauguaugucuuguugcag	HPV	US20110230546A1	56.94
AD-14887	gcugaauagggaggaaucc	JCV	US08058257	57.06
AD-14948	ucuggacauggaucaagca	JCV	US08058257	57.61
virsi1977	accaaaagaaacaccaucc	Hepatitis C Virus [HCV]	21073745	58
virsi1693	gaccacagcagagauuuau	Human Papillomavirus [HPV]	19887612	58
ND-9061	aaaucaacguguugcgauu	HPV	US20110230546A1	58.55
virsi1837	uuacucgcugaagcuggua	Human Coxsackievirus [CV]	17112603	59
ND-9064	uccaaaauugcguaguaca	HPV	US20110230546A1	59.21
AL-DP-8097	aauguguagacauuauaaa	HPV	US20110230546A1	59.71
virsi2048	ucuaccuccaucugguccg	Hepatitis Delta Virus [HDV]	12915586	60
virsi1750	gacagagcccauuacaaua	Human Papillomavirus [HPV]	18755502	60
virsi2203	acaaacaaacagcgaugaa	West Nile Virus [WNV]	19135091	60
ND-9121	agaugugauaggguagaug	HPV	US20110230546A1	60.63
AD-14859	gugcugaauagggaggaau	JCV	US08058257	60.93
PAT145	gaagagacaauugaagaaa	Influenza	WO 2007/053696 A2	61
AD-14840	ggauguugccuuuacuuuu	JCV	US08058257	61.49
AD-14817	gcugccacaggauuuucag	JCV	US08058257	62.17
ND-8931	uuagugaguauagacauua	HPV	US20110230546A1	62.45
ND-9067	agagccuccaaaauugcgu	HPV	US20110230546A1	62.87
virsi1256	gcagugugguuuagagcuu	Human Coxsackievirus [CV]	18662724	63
AD-14866	aaaagguagaagacccuaa	JCV	US08058257	63.27
AD-14762	uaagaggaggaguagaagu	JCV	US08058257	63.9
virsi1055	gggaggaguugggggagga	Hepatitis B Virus [HBV]	18201553	64
virsi1261	gcacuaugcaaaucagcua	Human Coxsackievirus [CV]	18662724	64
AL-DP-7805	gagguauaugacuuugcuu	HPV	US20110230546A1	64.13
AD-14850	cucaauggauguugccuuu	JCV	US08058257	64.48
ND-9128	aaagcauagaccauuggua	HPV	US20110230546A1	64.86
virsi1905	gcgcugcgacaauaucuuc	Herpes Simplex Virus [HSV]	18551244	65
virsi1428	gccaucugugugcuuaaga	Reovirus	16940517	65
AD-14767	ggaccuaguugcuacuguu	JCV	US08058257	65.18
ND-8925	cgacgugagguauaugacu	HPV	US20110230546A1	65.79
virsi1014	agcugaaauugauccaaug	Hepatitis A Virus [HAV]	15120607	66
AL-DP-8080	aaguggaaacucagcagau	HPV	US20110230546A1	66.09
AD-14856	gauuuugguacauggaaua	JCV	US08058257	66.39
AD-14867	aaagguagaagacccuaaa	JCV	US08058257	66.84
virsi1207	aaagguccgugagccgcuu	Hepatitis C Virus [HCV]	17305886	67
AD-14929	guguagacagccauaugca	JCV	US08058257	67.08
AD-14824	ggcugcugcuacuauagaa	JCV	US08058257	67.38
AD-14805	cuaguugcuacuguuucug	JCV	US08058257	67.56
ND-8924	gucgauguaugucuuguug	HPV	US20110230546A1	67.91
122	ggagagcuuaacagaacua	RSV	US20100254945A1	68.19647
AL-DP-8081	aguggaaacucagcagaug	HPV	US20110230546A1	68.55
AD-14900	guaagggcguggaggcuuu	JCV	US08058257	68.99
AD-14750	uauaagaggaggaguagaa	JCV	US08058257	69.14
A18676	cugaugcaauuuuugauga	Ebola Zaire virus	US 7759320	69.4
ND-9112	gguaguccacuuagugaua	HPV	US20110230546A1	69.76
New_67	cgugaaccuugcuauuccc	ASFV	20710054	70
virsi1966	gccuucacauucagaccuc	Hepatitis C Virus [HCV]	21161551	70
1099	cauggagcaaucacaagua	HIV	16378959	70
AD-14868	gauugugcaguggaaagaa	JCV	US08058257	70.09
ND-8940	cuuugcuuuucgggauuua	HPV	US20110230546A1	70.33
AD-14938	gagcaugacuuuaacccag	JCV	US08058257	70.62
AD-14897	ugcucaucagccugauuuu	JCV	US08058257	70.96
virsi1838	aauuaggacacuaaugcua	Human Coxsackievirus [CV]	17112603	71
virsi1584	ggaugaagaagauggccau	Influenza B Virus	16856616	71
ND-8952	uagugaguauagacauuau	HPV	US20110230546A1	71.18
AD-14807	uggagaggcugcugcuacu	JCV	US08058257	71.73
virsi1020	gugguggacuucucucaau	Hepatitis B Virus [HBV]	18274934	72
AD-14949	uuugguacauggaauaguu	JCV	US08058257	72.32
ND-9075	aacaccauguagucaguau	HPV	US20110230546A1	72.8
virsi1808	gcacgaauaugaggaguuc	Human Coxsackievirus [CV]	16164410	73
AD-14896	gcucaucagccugauuuug	JCV	US08058257	73.01
AL-DP-8082	auggcaauacugaagugga	HPV	US20110230546A1	73.59
virsi1073	cuaccgugugucuuggcca	Hepatitis B Virus [HBV]	15756649	74
virsi1689	acaagacgcacaaccuuua	Human Papillomavirus [HPV]	19887612	74
ND-8920	cgacccagaaaguuaccac	HPV	US20110230546A1	74.8
virsi1441	auuggucuguucaccagca	Hepatitis B Virus [HBV]	16443303	75
virsi2194	ccugauuggcaugcuacag	Hepatitis E Virus [HEV]	20105445	75
virsi1702	cuaacuaacacuggguuau	Human Papillomavirus [HPV]	12955072	75
virsi1522	uagagagaauggugcucuc	Influenza A Virus	12594334	75
virsi1922	cgcacaguggauccuaggc	Lassa Virus	17371814	75
virsi2205	agagccauuugguucaugu	West Nile Virus [WNV]	19135091	75
AD-14893	cuauugcuuugauugcuuc	JCV	US08058257	75.57
virsi1849	ccaauagaguccaccaguu	Epstein-Barr Virus [EBV]	15041532	76
virsi1575	ggaaagaauuugaccuaga	Influenza B Virus	16856616	76
ND-8945	aacaguuacugcgacguga	HPV	US20110230546A1	76.2
ND-8967	cagaucaucaagaacacgu	HPV	US20110230546A1	76.7
1411	aggcuaauuuuuuagggaa	HIV	19384894	77
ND-8903	aucaucaagaacacguaga	HPV	US20110230546A1	77.05
virsi1771	aucggagcuucgucgaaug	Enterovirus [EV]	15530419	78
virsi1056	gggaggagauuagauuaaa	Hepatitis B Virus [HBV]	18201553	78
PAT203	aucuuauuucuucggagac	Influenza	WO 2007/053696 A2	78
ND-8936	gagcgacccagaaaguuac	HPV	US20110230546A1	78.02
AD-14880	caucagccugauuuuggua	JCV	US08058257	78.35
virsi1224	gucaauaugcuaaaacgcg	St. Louis Encephalitis [SLE]	21423625	79
ND-9123	ucagaugacgagaacgaaa	HPV	US20110230546A1	79.63
virsi1464	uucaccucugcacgucgca	Hepatitis B Virus [HBV]	14592428	80
virsi1904	aucggcccugaaguaugag	Herpes Simplex Virus [HSV]	18551244	80
virsi2128	ggauagaacuugaugaaau	Influenza A Virus	20060420	80
virsi1433	ucaucaagcauccaccaug	Reovirus	16940517	80
ND-8929	gcaacaguuacugcgacgu	HPV	US20110230546A1	80.14
virsi1174	ggucucguagaccgugcau	Hepatitis C Virus [HCV]	16496015	81
virsi2124	ggaacaagccguagacaua	Influenza A Virus	20060420	81
virsi1048	gaccgugugcacuucgcuu	Hepatitis B Virus [HBV]	18201553	82
virsi1269	gcacuuccagagauucguu	Human Coxsackievirus [CV]	18662724	82
virsi1574	gccaaucccguugaaauuc	Influenza B Virus	16856616	82
PAT304	gggugaacagcauguaaua	Metapneumovirus	US 2010/0254945 A1	82.8
virsi1215	ggucaccuuugacagacug	Hepatitis C Virus [HCV]	17305886	83
virsi1267	gggaaacacuacccgguua	Human Coxsackievirus [CV]	18662724	83
virsi1039	ugucaacgaccgaccuuga	Hepatitis B Virus [HBV]	17596868	84
PAT350	gcaaucagccauguggauu	Metapneumovirus	US 2010/0254945 A1	84
PAT376	ccauugguguggaauauua	Metapneumovirus	US 2010/0254945 A1	84.3
virsi1891	aucaacaccauaaaguacc	Herpes Simplex Virus [HSV]	17979991	85
virsi2125	uggcaaauguugugagaaa	Influenza A Virus	20060420	85
virsi1686	agguucggaugguucggga	Measles Virus	18634829	85
virsi2201	ccgcgaagugauccaugua	West Nile Virus [WNV]	19135091	85
virsi1136	uucgcaguccccaaccucc	Hepatitis B Virus [HBV]	15378775	86
virsi1585	ggauccucaacucacucuu	Influenza B Virus	16856616	86
PAT457	ugagauacauuugaugaaa	RSV	EP1833490A2	86
virsi1794	ucucauagcauuugauuac	Human Coxsackievirus [CV]	20005874	87
PAT449	agcaaauucaaucaagcau	RSV	EP1833490A2	87
virsi2287	agauuguugccaguacuaa	Hazara Nairovirus	21600011	88
virsi1898	uuaauagacaaugaccaca	Herpes Simplex Virus [HSV]	16306938	88
PAT447	augugaauucccugcauca	RSV	EP1833490A2	88
virsi1158	gaucaggcaacuauugugg	Hepatitis B Virus [HBV]	12668968	89
PAT444	acaagauauggugaucuag	RSV	EP1833490A2	89
118	ccaacuguuaacauggaaa	RSV	US20100254945A1	89.867809
virsi1915	aucgguguguaugcuaaag	Herpes Simplex Virus [HSV]	16140767	90
1228	gacaguacuaaauggagaa	HIV	17652404	90
virsi1578	ggaaggaauugcaaaggau	Influenza B Virus	16856616	90
New_45	acuguuuaauauugcacaa	orthopoxvirus	18572748	90
PAT441	ccagcuuauagaacaacaa	RSV	EP1833490A2	90
virsi1347	gggcuaucaaccuauagau	SARS Coronavirus	15652970	90
A18480	gaugaagauuaaaaccuuc	Ebola Zaire virus	US 7759320	90.7
virsi1793	cuaaggaccuaacaaaguu	Human Coxsackievirus [CV]	20005874	91
80	gcugucagcuucagucaau	RSV	US20100254945A1	91.067199
1115	cagugcaggggaaagaaua	HIV	16948865	92
virsi2027	gaugcagcuuccaguggug	Human Rhinovirus	14670593	92
PAT434	auaccagcuuauagaacaa	RSV	EP1833490A2	92
virsi1462	cguuucuccuggcucaguu	Hepatitis B Virus [HBV]	14592428	93
virsi2300	aacauaaccugaugacacc	Junin Virus	19591878	93
1122	agagagaugggugcgagag	HIV	16959541	94
PAT429	aauucccugcaucaauacc	RSV	EP1833490A2	94
virsi1773	ccagcgguccugacuagua	Enterovirus [EV]	15530419	95
1582	guucagaaguacacauccc	HIV	15831707	95
virsi1657	acagcagaaugcuguggau	Influenza A Virus	19479060	95
1434	gagccaccccacaagauuu	HIV	19497094	95.9
1135	acaggagcagaugauacag	HIV	16959541	96
PAT424	gucaguaguagaccaugug	RSV	EP1833490A2	96
PAT363	ccuguuuauaacagacaaa	Metapneumovirus	US 2010/0254945 A1	96.4
1212	gaagaaaugaugacagcau	HIV	17331227	97
PAT419	cauuaaauagccuuaaauu	RSV	EP1833490A2	97
1121	gagagagaugggugcgaga	HIV	16959541	98
virsi1638	acgccuaccagaaacgaau	Influenza A Virus	17719657	98
PAT414	gaaauacuaggaaugcuuc	RSV	EP1833490A2	98
PAT155	gaagcaauugaggagugcc	Influenza	WO 2007/053696 A2	99
virsi1436	gcagcugccaaaugucaaa	Reovirus	16940517	99
virsi1061	gccucaucuucuuauuggu	Hepatitis B Virus [HBV]	16153600	100
1600	gugaaggggcaguaguaau	HIV	18077712	100
virsi1286	cagcuugagucuacacaaa	SARS Coronavirus	16894145	100
PAT26	uaaccgaggucgaaacgua	Influenza	WO 2007/053696 A2	-107
PAT193	cccgaucgugccuuccuuu	Influenza	WO 2007/053696 A2	-80
PAT6	gucgaaacguacguucucu	Influenza	WO 2007/053696 A2	-70
PAT32	aggucgaaacguacguucu	Influenza	WO 2007/053696 A2	-59
PAT50	ucuucuaaccgaggucgaa	Influenza	WO 2007/053696 A2	-53
A18660	uuauuauaauccaccacau	Ebola Zaire virus	US 7759320	-50.7
PAT326	ccuaaaauuaaguaugaua	Metapneumovirus	US 2010/0254945 A1	-46.3
PAT66	caacgaacccgaucgugcc	Influenza	WO 2007/053696 A2	-43
PAT325	gcucacauuauuaaaacaa	Metapneumovirus	US 2010/0254945 A1	-39.7
A18670	ucagguuuuaucuauuuug	Ebola Zaire virus	US 7759320	-36.8
PAT52	cuucagaucgaacggucua	Influenza	WO 2007/053696 A2	-34
AL-DP-8043	uaucaaauauuagugaagu	HPV	US20110230546A1	-31.44
PAT31	gaggucgaaacguacguuc	Influenza	WO 2007/053696 A2	-29
PAT183	uuacugacagccagacagc	Influenza	WO 2007/053696 A2	-26
PAT120	cagugagcgaggacugcag	Influenza	WO 2007/053696 A2	-24
PAT76	agacuuugugcgacaaugc	Influenza	WO 2007/053696 A2	-22
PAT142	gcccccucaaagccgagau	Influenza	WO 2007/053696 A2	-21
PAT119	ccagugagcgaggacugca	Influenza	WO 2007/053696 A2	-20
PAT70	aacgaacccgaucgugccu	Influenza	WO 2007/053696 A2	-19
PAT19	uugcacuugauauugugga	Influenza	WO 2007/053696 A2	-18
PAT34	gcuaaagacaagaccaauc	Influenza	WO 2007/053696 A2	-17
PAT399	ggacugcaauauaaaguua	Metapneumovirus	US 2010/0254945 A1	-15.9
1201	aaaagaaaaggggggacug	HIV	16959541	-14
PAT54	agaucgaacggucuaacag	Influenza	WO 2007/053696 A2	-13
PAT373	ccuccuguauuucaaggaa	Metapneumovirus	US 2010/0254945 A1	-12.5
A18580	aucaguaggacacaugaug	Ebola Zaire virus	US 7759320	-11.3
AD-14841	uguugccuuuacuuuuagg	JCV	US08058257	-10.86
PAT127	cacuugauauuguggauuc	Influenza	WO 2007/053696 A2	-10
A18652	ugcaugucagugauuauua	Ebola Zaire virus	US 7759320	-8.9
A18634	aaacugcuacaaucuugaa	Ebola Zaire virus	US 7759320	-8.3
PAT252	cuaaacuagcaucaacaau	Metapneumovirus	US 2010/0254945 A1	-7.5
PAT39	cgcucaccgugcccaguga	Influenza	WO 2007/053696 A2	-7
PAT393	gguaacuggauggcaagaa	Metapneumovirus	US 2010/0254945 A1	-6.5
PAT60	agucuuacauaaaucggac	Influenza	WO 2007/053696 A2	-6
PAT391	ccuaagguucuuuacuuua	Metapneumovirus	US 2010/0254945 A1	-5.7
PAT102	agaccaauccugucaccuc	Influenza	WO 2007/053696 A2	-5
AL-DP-8087	cuuuuucucaaggacgugg	HPV	US20110230546A1	-4.24
PAT278	ggaaaaaguaaacacuaua	Metapneumovirus	US 2010/0254945 A1	-3.5
A18632	aaaacugcuacaaucuuga	Ebola Zaire virus	US 7759320	-2.5
PAT255	gaucuuucuaugaacuauu	Metapneumovirus	US 2010/0254945 A1	-0.4
New_64	uuuaacgagaacgugaacc	ASFV	20710054	0
virsi2335	ggacuagagguuagaggag	Dengue Virus [DENV]	21795337	0
virsi2294	caaauacuuugucaccaaa	Hazara Nairovirus	21600011	0
New_21	guccuuuaccgggaguucg	HCV	WO 2006/129961 A1	0
virsi1314	guuuaaagacugggaggag	Hepatitis B Virus [HBV]	16022904	0
1595	gcggaggcuagaaggagag	HIV	14963165	0
1531	cuggggaguggcgagcccu	HIV	19771207	0
virsi1824	cagacauggugcgaagagu	Human Coxsackievirus [CV]	18691577	0
virsi1819	cucacgcgguugaaggaga	Human Coxsackievirus [CV]	18691577	0
virsi2087	ccacuguuuacuacccaaa	Human Metapneumovirus	18839783	0
virsi1747	gggaauccauaugcuguau	Human Papillomavirus [HPV]	18755502	0
PAT58	ucuuacauaaaucggacag	Influenza	WO 2007/053696 A2	0
New_37	ggacgaaauauaucaguca	orthopoxvirus	18572748	0
New_42	caagguagaucguauagga	orthopoxvirus	18572748	0
New_51	ccggaguaauugauuauaa	orthopoxvirus	18572748	0
virsi1235	uuuggaaaggggagcauug	West Nile Virus [WNV]	21423625	0
virsi1172	cccgggaggucucguagac	Hepatitis C Virus [HCV]	16496015	1
ND-9103	ugcauauuacuauauggug	HPV	US20110230546A1	1.83
PAT100	caagaccaauccugucacc	Influenza	WO 2007/053696 A2	2
PAT478	ugucauccagcaaauagag	RSV	EP1833490A2	2
PAT403	cggaaguaagauuauagaa	Metapneumovirus	US 2010/0254945 A1	2.7
virsi1601	gcgaugacauggagagaaa	Influenza B Virus	16856616	3
176	ggaaauugauaaaggacuu	RSV	US20100254945A1	3.1564295
PAT398	ggaacagaucuuuacuuau	Metapneumovirus	US 2010/0254945 A1	3.8
PAT80	auguggauggauucgaacc	Influenza	WO 2007/053696 A2	4
PAT471	gugaaauacuaggaaugcu	RSV	EP1833490A2	4
virsi2026	gugcacacaauccagugug	Human Rhinovirus	14670593	5
PAT467	cauuugauaacaaugaaga	RSV	EP1833490A2	5
5	cauauaaacaugcuauauu	RSV	US20100254945A1	5.4806332
virsi1209	agguccgugagccgcuuga	Hepatitis C Virus [HCV]	17305886	6
AD-14748	aauguuggguuccugaucc	JCV	US08058257	6.01
54	gcuucaggucuagguauaa	RSV	US20100254945A1	6.5848387
AD-14845	uuuggaagaaacuacuugg	JCV	US08058257	6.88
PAT199	cgugccuuccuuugacaug	Influenza	WO 2007/053696 A2	7
PAT461	uuccuagaaucaauaaagg	RSV	EP1833490A2	7
AD-14826	uuuuuuuguguuuucaggu	JCV	US08058257	7.55
103	ggacacacaaagaauuaaa	RSV	US20100254945A1	7.9744776
virsi1232	gaauguccuggaucacaca	West Nile Virus [WNV]	21423625	8
61	gggaaaaaguaaacacuau	RSV	US20100254945A1	8.8872044
PAT173	ucuagcauacuuacugaca	Influenza	WO 2007/053696 A2	9
196	ccaauaugaucaagcuuau	RSV	US20100254945A1	9.5708334
virsi1716	aacgaugaaauagauggag	Human Papillomavirus [HPV]	17589817	10
virsi1348	uuucgcaauuccguuuacg	SARS Coronavirus	15652970	10
A18558	uugaugaagauuaagaaaa	Ebola Zaire virus	US 7759320	10.6
A18636	aacugcuacaaucuugaaa	Ebola Zaire virus	US 7759320	11
virsi2064	guuugccauaaagccaggu	Reovirus	16940517	11
A18640	agcaaauccaacggcugau	Ebola Zaire virus	US 7759320	11.9
PAT109	ucacgcucaccgugcccag	Influenza	WO 2007/053696 A2	12
AL-DP-8094	uauggcaauacugaagugg	HPV	US20110230546A1	12.49
A18594	auggugauuuuccguuuga	Ebola Zaire virus	US 7759320	13
51	caacauaaugcuaggacau	RSV	US20100254945A1	13.169373
1156	aaagaaaaggggggauugg	HIV	16959541	14
virsi1316	gcuaacaaagaaggcaucg	SARS Coronavirus	17139181	14
68	cgagaaggcaaaagaacuu	RSV	US20100254945A1	14.890682
1166	uucaaaauuuucggguuua	HIV	16959541	15
PAT10	ucgaaacguacguucucuc	Influenza	WO 2007/053696 A2	15
virsi1234	guugucaauaugcuaaaac	West Nile Virus [WNV]	21423625	15
virsi1786	aguccaaaugccguauuga	Enterovirus [EV]	17554034	16
PAT251	ccagacacaccaauaauuu	Metapneumovirus	US 2010/0254945 A1	16.1
AD-14889	uguguagacagccauaugc	JCV	US08058257	16.91
A18496	auuaaaaccuucaucaucc	Ebola Zaire virus	US 7759320	17.5
virsi1798	aagcaccauuagaaucuac	Human Coxsackievirus [CV]	15956603	18
virsi1664	auguaucccuccuguugcu	Hepatitis B Virus [HBV]	15387899	19
virsi1887	ggcuagauuuccuacaacu	Epstein-Barr Virus [EBV]	17108049	20
New_9	uauaucccggccacgugac	HCV	WO 2006/129961 A1	20
PAT113	ccgugcccagugagcgagg	Influenza	WO 2007/053696 A2	20
132	ccacaaugauaugugcaua	RSV	US20100254945A1	20.487506
PAT347	cccauaaaaaagauauuaa	Metapneumovirus	US 2010/0254945 A1	21
1153	uuaaaagaaaaggggggau	HIV	16959541	22
PAT337	cgguauauccaaaaaauua	Metapneumovirus	US 2010/0254945 A1	22
PAT228	gcagagauagggauacaau	Metapneumovirus	US 2010/0254945 A1	22.8
PAT135	ccgucaggcccccucaaag	Influenza	WO 2007/053696 A2	23
AD-14928	ggaggccagggaaauuccc	JCV	US08058257	23.25
A18616	agugaugaagauuaagaaa	Ebola Zaire virus	US 7759320	23.9
PAT208	gggcggggagucuucgagc	Influenza	WO 2007/053696 A2	24
23	gauauacauggaguggaaa	RSV	US20100254945A1	24.291374
virsi3006	ccaugacaccagcugauaa	Human Coxsackievirus [CV]	18793610	25
PAT274	gcucacagacgaagaaaaa	Metapneumovirus	US 2010/0254945 A1	25.3
PAT225	ggagagauucuuuacacua	Metapneumovirus	US 2010/0254945 A1	25.9
1182	uauggaaaacagauggcag	HIV	16959541	26
virsi1576	gaaagcucagcgcuacuau	Influenza B Virus	16856616	26
AD-14821	ugaaauugcaucccuugcu	JCV	US08058257	26.92
AD-14766	uuguguuuucagguucaug	JCV	US08058257	27.41
PAT81	uguggauggauucgaaccg	Influenza	WO 2007/053696 A2	28
A18574	gcaaucaguaggacacaug	Ebola Zaire virus	US 7759320	28.7
virsi2305	ggaccgacauuguggaggu	Yellow Fever Virus	19169857	29
New_12	augggaguauguccuguug	HCV	WO 2006/129961 A1	30
New_26	gaggacgguuguccuguca	HCV	WO 2006/129961 A1	30
virsi1133	gcgucgcagaagaucucaa	Hepatitis B Virus [HBV]	19026173	30
virsi2081	gcuauaagagaagaacuaa	Human Metapneumovirus	18839783	30
virsi2202	gaacggcugucaagaacaa	West Nile Virus [WNV]	19135091	30
PAT392	gcagguaacuggauggcaa	Metapneumovirus	US 2010/0254945 A1	31.3
1148	caauuuuaaaagaaaaggg	HIV	16959541	32
virsi2066	agcagucgggauugauacu	Reovirus	16940517	32
AD-14798	uagaaguugaaauugcauc	JCV	US08058257	32.61
1164	aaaauucaaaauuuucggg	HIV	16959541	33
PAT412	gcagagauaaaaaaacuaa	Metapneumovirus	US 2010/0254945 A1	33
AL-DP-8060	aacaauguguagacauuau	HPV	US20110230546A1	33.56
A18650	augcaugucagugauuauu	Ebola Zaire virus	US 7759320	34.1
ND-9111	augacauaguagacgauag	HPV	US20110230546A1	34.86
New_63	gauguaaauggaaauuccc	ASFV	20710054	35
1173	cuggaaaggugaaggggca	HIV	16959541	35
PAT114	cgugcccagugagcgagga	Influenza	WO 2007/053696 A2	35
AD-14777	uguuuucagguucaugggu	JCV	US08058257	35.45
virsi1283	gaaccacugcaacuuuggu	Human Coxsackievirus [CV]	18662724	36
virsi1941	cagguucggaugguucgag	Measles Virus	18394725	36
AL-DP-7778	gugauuuguuaauuaggug	HPV	US20110230546A1	36.69
virsi1610	ggaaguaaacacucagaaa	Influenza B Virus	16856616	37
AD-14744	uacgggacuguaacaccug	JCV	US08058257	37.8
virsi1949	ccgguuggugagguuaauu	Measles Virus	18394725	38
185	ggacuugauacacagaaua	RSV	US20100254945A1	38.979288
AD-14778	aucccuugcuacuguagag	JCV	US08058257	39.55
New_10	ugacucccucaacacuggg	HCV	WO 2006/129961 A1	40
New_35	acacuccaggccaauaggc	HCV	WO 2006/129961 A1	40
virsi1495	augcucgugauagguccau	West Nile Virus [WNV]	15747251	40
1675	cugccuggcuagaagcaca	HIV	18668146	41
AD-14834	gccuuuacuuuuaggguug	JCV	US08058257	41.95
virsi1236	gaaaggggagcauugacac	West Nile Virus [WNV]	21423625	42
virsi1199	uagucacggcuagcuguga	Hepatitis C Virus [HCV]	17305886	43
PAT198	ucgugccuuccuuugacau	Influenza	WO 2007/053696 A2	43
AD-14756	cuguugaauguuggguucc	JCV	US08058257	43.31
virsi1258	gcuauuccaccuaugugaa	Human Coxsackievirus [CV]	18662724	44
PAT351	gccuuauuaucuauagaaa	Metapneumovirus	US 2010/0254945 A1	44.1
AD-14795	aauugcugcuggagaggcu	JCV	US08058257	44.94
virsi1254	guagccugaaugacucagu	Human Coxsackievirus [CV]	18662724	45
virsi1237	guccuggaucacacaggga	West Nile Virus [WNV]	21423625	46
AD-14858	agcccacuuguguggauag	JCV	US08058257	46.4
AD-14922	agcucaaauuuuauauaag	JCV	US08058257	47.06
PAT179	auacuuacugacagccaga	Influenza	WO 2007/053696 A2	48
146	ggguuguuaucuaggauau	RSV	US20100254945A1	48.390028
virsi1015	gaaacuuggcaugacagcu	Hepatitis A Virus [HAV]	15120607	49
PAT146	uuuagagccuauguggaug	Influenza	WO 2007/053696 A2	49
AL-DP-8076	acugaaguggaaacucagc	HPV	US20110230546A1	49.6
New_18	cgagguuacuaccacacac	HCV	WO 2006/129961 A1	50
1109	gacuggaagggcuaauuca	HIV	16840344	50
PAT83	uggauggauucgaaccgaa	Influenza	WO 2007/053696 A2	50
virsi1521	ugcuucuugguucaacucc	Influenza A Virus	12594334	50
New_55	cauguuccauuuauaagaa	orthopoxvirus	18572748	50
A18606	gagaagcaacuccaacaau	Ebola Zaire virus	US 7759320	50.2
ND-8909	ucaucaagaacacguagag	HPV	US20110230546A1	50.64
PAT186	cugacagccagacagcgac	Influenza	WO 2007/053696 A2	51
AD-14768	cugccacaggauuuucagu	JCV	US08058257	51.32
virsi1964	acauaagaggacucuugga	Hepatitis B Virus [HBV]	20538734	52
virsi1945	gcucuuggacugcaugaau	Measles Virus	18394725	52
AD-14885	uuuugguacauggaauagu	JCV	US08058257	52.6
AD-14789	uuuuguguuuucagguuca	JCV	US08058257	53.04
virsi1091	guguuugcugacgcaaccc	Hepatitis B Virus [HBV]	15754419	54
virsi1565	gcagacucacagaacuuca	Influenza B Virus	16856616	54
AD-14771	accuaguugcuacuguuuc	JCV	US08058257	54.43
ND-8908	aaauuagugaguauagaca	HPV	US20110230546A1	54.85
virsi1901	uaugaaguacgucgagugg	Herpes Simplex Virus [HSV]	16306938	55
virsi1696	cggagacaucagacaacua	Human Papillomavirus [HPV]	19887612	55
AD-14848	caaaugugcaaucugguga	JCV	US08058257	55.6
AL-DP-8063	aaaugugugucaggacaaa	HPV	US20110230546A1	56.17
ND-9078	guguauggagacacgccag	HPV	US20110230546A1	56.58
virsi1088	ccucuuguccuccaauuug	Hepatitis B Virus [HBV]	15754419	57
AD-14934	ugggaugaagaccuguuuu	JCV	US08058257	57.06
AD-14774	ggccuuacuccugaaacau	JCV	US08058257	57.62
virsi2193	caaguucaccacaggugag	Hepatitis E Virus [HEV]	20105445	58
PAT116	ugcccagugagcgaggacu	Influenza	WO 2007/053696 A2	58
78	ggcuugagagugaagugaa	RSV	US20100254945A1	58.595219
virsi1270	gcagcacuaguagagacaa	Human Coxsackievirus [CV]	18662724	59
ND-9098	accauguagucaguauagu	HPV	US20110230546A1	59.24
virsi1202	gugaaagguccgugagccg	Hepatitis C Virus [HCV]	17305886	60
virsi1816	cuguaacuuagaaguaaca	Human Coxsackievirus [CV]	18691577	60
PAT147	uuagagccuauguggaugg	Influenza	WO 2007/053696 A2	60
AD-14933	ugaagaccuguuuugccau	JCV	US08058257	60.06
AD-14871	caugacuuuaacccagaag	JCV	US08058257	60.63
virsi1113	caacacauagcgccucauu	Hepatitis B Virus [HBV]	19026173	61
AL-DP-8077	cugaaguggaaacucagca	HPV	US20110230546A1	61.01
AL-DP-8058	acagcggguauggcaauac	HPV	US20110230546A1	61.53
ND-9101	cguguugcgauugguguau	HPV	US20110230546A1	62.25
AD-14773	aggccuuacuccugaaaca	JCV	US08058257	62.62
AD-14838	ggaagaaacuacuugggca	JCV	US08058257	62.94
virsi1271	gcauauaugugggcaacua	Human Coxsackievirus [CV]	18662724	63
ND-9081	ugacauaguagacgauagu	HPV	US20110230546A1	63.34
AD-14851	gcucaaauuuuauauaaga	JCV	US08058257	63.93
virsi1175	ucucguagaccgugcauca	Hepatitis C Virus [HCV]	16496015	64
virsi1827	cguaacgggcaacucugca	Human Coxsackievirus [CV]	18691577	64
AD-14884	cagcccacuuguguggaua	JCV	US08058257	64.27
AL-DP-8056	agacagcggguauggcaau	HPV	US20110230546A1	64.49
virsi1440	ugaucuuuguacuaggagg	Hepatitis B Virus [HBV]	16443303	65
virsi1282	gaagggaugguauuggaaa	Human Coxsackievirus [CV]	18662724	65
virsi1367	gugaacucacucgugagcu	SARS Coronavirus	14645307	65
AD-14872	auagggaggaauccaugga	JCV	US08058257	65.29
AD-14906	gcuucagacaaugguuugg	JCV	US08058257	65.8
1388	agaugggugcgagagcguu	HIV	18346971	66
AD-14894	auugcaaggaauggccuaa	JCV	US08058257	66.16
ND-9119	agacaauaauauuaguccu	HPV	US20110230546A1	66.63
AD-14921	gaggccagggaaauucccu	JCV	US08058257	66.87
virsi1272	gacuaguagagacaagaua	Human Coxsackievirus [CV]	18662724	67
AD-14788	aguaaaaccuggaguggaa	JCV	US08058257	67.16
ND-9070	gggaagaggguacgggaug	HPV	US20110230546A1	67.39
AD-14932	agugggaugaagaccuguu	JCV	US08058257	67.58
virsi1049	cgcuucaccucugcacguc	Hepatitis B Virus [HBV]	18201553	68
AL-DP-8096	gcaauacugaaguggaaac	HPV	US20110230546A1	68.26
AD-14931	gaagaccuguuuugccaug	JCV	US08058257	68.64
virsi1138	gaagaacucccucgccucg	Hepatitis B Virus [HBV]	15378775	69
AD-14876	augacuuuaacccagaaga	JCV	US08058257	69.26
ND-9097	ggagauuauuugaaagcga	HPV	US20110230546A1	69.49
AD-14810	gcugcugcuacuauagaag	JCV	US08058257	69.89
virsi1051	agaccaccgugaacgccca	Hepatitis B Virus [HBV]	18201553	70
virsi2056	ggguugaguagcacucaga	Hepatitis Delta Virus [HDV]	12915586	70
virsi1697	gaauguguguacugcaagc	Human Papillomavirus [HPV]	14599809	70
AD-14782	uguuagaauuuuugcugga	JCV	US08058257	70.1
AD-14911	aagaaaaagcucaaauuuu	JCV	US08058257	70.38
ND-9080	uacaaugggccuacgauaa	HPV	US20110230546A1	70.67
ND-8918	cugcaaacaacuauacaug	HPV	US20110230546A1	70.99
virsi2032	ccagacacauacuccucag	Human Rhinovirus	14670593	71
AD-14797	gcuguagcuggguuugcug	JCV	US08058257	71.05
168	gcaugaaguacccuggauu	RSV	US20100254945A1	71.180344
AD-14869	ggauugugcaguggaaaga	JCV	US08058257	71.76
PAT213	ugacgauggucauuuuguc	Influenza	WO 2007/053696 A2	72
AD-14881	auggacaaagugcugaaua	JCV	US08058257	72.34
AD-14927	agggaaauucccuuguuuu	JCV	US08058257	72.98
virsi1276	ggacaacuucacuaugaaa	Human Coxsackievirus [CV]	18662724	73
7804	acugcgacgugagguauau	HPV	US20110230546A1	73.19
AL-DP-8064	gguucuaaaacgaaaguau	HPV	US20110230546A1	73.75
virsi1008	ggaaccucuauguaucccu	Hepatitis B Virus [HBV]	18378325	74
PAT161	ccuggguuuugcuuaaugc	Influenza	WO 2007/053696 A2	74
AL-DP-7784	guauggaacaacauuagaa	HPV	US20110230546A1	74.91
virsi1047	cccgucugugccuucucau	Hepatitis B Virus [HBV]	18201553	75
virsi1900	gaguucugcacgaucacgu	Herpes Simplex Virus [HSV]	16306938	75
virsi1690	auagugaccuguugcugug	Human Papillomavirus [HPV]	19887612	75
virsi1520	ugaucccuggguuuugcuu	Influenza A Virus	12594334	75
virsi1430	gcguguuccgauuaugcac	Reovirus	16940517	75
ND-8922	guuacugcgacgugaggua	HPV	US20110230546A1	75.05
ND-8923	ugcgacgugagguauauga	HPV	US20110230546A1	75.61
virsi1461	gacuaccaagguauguugc	Hepatitis B Virus [HBV]	14592428	76
virsi1555	gucacccaaagcaagugag	Influenza B Virus	16856616	76
ND-9092	guguagacauuauaaacga	HPV	US20110230546A1	76.21
ND-8948	aucaagaacacguagagaa	HPV	US20110230546A1	76.78
virsi1768	gcacacacguagacauucg	Human Papillomavirus [HPV]	16369495	77
PAT353	gcuacauuaacaacacuaa	Metapneumovirus	US 2010/0254945 A1	77.3
virsi1094	acccuuauaaagaauuugg	Hepatitis B Virus [HBV]	14512871	78
virsi2057	gcgaggaggaaagcaaaga	Hepatitis Delta Virus [HDV]	12915586	78
PAT200	gugccuuccuuugacauga	Influenza	WO 2007/053696 A2	78
ND-8956	cggucgauguaugucuugu	HPV	US20110230546A1	78.06
virsi1443	uuuggaagagaaaccguua	Hepatitis B Virus [HBV]	17245534	79
AD-14743	caugcuuccuuguuacagu	JCV	US08058257	79.08
ND-8951	agaugggaauccauaugcu	HPV	US20110230546A1	79.79
virsi1466	uucaccucugccuaaucau	Hepatitis B Virus [HBV]	14592428	80
virsi1730	ggcaacauugcaagacauu	Human Papillomavirus [HPV]	15908516	80
virsi1564	gagcauggaauagagacuc	Influenza B Virus	16856616	80
virsi1343	gaauauuaggcgcaggcug	SARS Coronavirus	15220426	80
AD-14920	agugcugaauagggaggaa	JCV	US08058257	80.2
virsi1194	gcuccaucuuagcccuagu	Hepatitis C Virus [HCV]	17305886	81
163	gcaugccauugguguggaa	RSV	US20100254945A1	81.254361
virsi1127	cuaggaggcuguaggcaua	Hepatitis B Virus [HBV]	19026173	82
PAT151	agccuauguggauggauuc	Influenza	WO 2007/053696 A2	82
virsi1566	ggaaugaggagcuacauag	Influenza B Virus	16856616	82
virsi1504	acacaacauggaacaauag	Dengue Virus [DENV]	20015996	83
virsi1965	cauaucuaggugcuggacc	Hepatitis C Virus [HCV]	21161551	83
virsi1278	guacagguaagaugcucau	Human Coxsackievirus [CV]	18662724	83
virsi1806	guacaaaacuuuccaccua	Human Coxsackievirus [CV]	16164410	84
PAT459	uauagaaccuacauauccu	RSV	EP1833490A2	84
virsi1505	cauagaagcagaaccucca	Dengue Virus [DENV]	20015996	85
virsi1789	gcaugucaaagcguggaua	Human Coxsackievirus [CV]	15681418	85
virsi1484	cagcaugcaaaucgaagac	Japanese Encephalitis Virus [JE]	16791421	85
virsi1344	caaggcgauuagucaaauu	SARS Coronavirus	15652970	85
virsi2198	ugaccucaauaaacguuca	West Nile Virus [WNV]	19135091	85
1136	caggagcagaugauacagu	HIV	16959541	86
PAT453	aaguccacuacuagagcau	RSV	EP1833490A2	86
virsi1355	gagucgaagagaggugucu	SARS Coronavirus	14645307	86
PAT149	agagccuauguggauggau	Influenza	WO 2007/053696 A2	87
PAT452	agucaguaguagaccaugu	RSV	EP1833490A2	87
virsi1467	augccccuaucuuaucaac	Hepatitis B Virus [HBV]	14592428	88
1117	gggacuggaagggcuaauu	HIV	16948865	88
PAT448	uaccagcuuauagaacaac	RSV	EP1833490A2	88
virsi1999	gcacuucgcuucaccucug	Hepatitis B Virus [HBV]	16022904	89
PAT445	auacauuugaugaaaccuc	RSV	EP1833490A2	89
virsi1192	guggcuccaucuuagcccu	Hepatitis C Virus [HCV]	17305886	90
virsi1916	gugaaacgauguguuauaa	Herpes Simplex Virus [HSV]	16140767	90
1374	gccugugccucuucagcua	HIV	18068205	90
virsi1498	ggauguggacuuuucggga	Japanese Encephalitis Virus [JE]	16464133	90
New_46	caccuugugcauuauguaa	orthopoxvirus	18572748	90
PAT442	cgauaauauaacagcaaga	RSV	EP1833490A2	90
virsi1284	ugcaucaacgcauguagaa	SARS Coronavirus	16894145	90
73	ccauaugggauggugucaa	RSV	US20100254945A1	90.861596
virsi1562	gaagaaugucaaaggauga	Influenza B Virus	16856616	91
virsi1506	ggauguggauuauuuggaa	Dengue Virus [DENV]	20015996	92
1602	gaaccaaggggaagugaca	HIV	17715143	92
virsi1641	agagcaaugauggaucaag	Influenza A Virus	17719657	92
PAT435	gagauacauuugaugaaac	RSV	EP1833490A2	92
1179	aggugaaggggcaguagua	HIV	16959541	93
PAT431	gauacauuugaugaaaccu	RSV	EP1833490A2	93
1190	auggcaggaagaagcggag	HIV	16959541	94
PAT430	cagcuuauagaacaacaaa	RSV	EP1833490A2	94
virsi1152	caucacaucaggauuccua	Hepatitis B Virus [HBV]	16900331	95
1140	auuggaggaaaugaacaag	HIV	16959541	95
PAT427	accagcuuauagaacaaca	RSV	EP1833490A2	95
virsi1468	gacuucaaccccaacaagg	Hepatitis B Virus [HBV]	14592428	96
virsi1700	gagguauuugaauuugcau	Human Papillomavirus [HPV]	16138119	96
PAT422	uagcauuaaauagccuuaa	RSV	EP1833490A2	96
PAT276	gcagaagcuuuccagaaau	Metapneumovirus	US 2010/0254945 A1	96.5
virsi1701	ccuguguauauugcaagac	Human Papillomavirus [HPV]	16138119	97
PAT420	uauuaugcaguuuaauauu	RSV	EP1833490A2	97
1670	cauguggcaggaaguagga	HIV	17176628	98
virsi1642	ugauggaaagugccagacc	Influenza A Virus	17719657	98
PAT417	ggcucuuagcaaagucaag	RSV	EP1833490A2	98
PAT154	ugaagcaauugaggagugc	Influenza	WO 2007/053696 A2	99
virsi1774	gaaauuggcucgaauuguu	Enterovirus [EV]	17712333	100
virsi1059	gguauguugcccguuuguc	Hepatitis B Virus [HBV]	16153600	100
virsi1718	ccacaacgucacacaaugu	Human Papillomavirus [HPV]	17589817	100
virsi1497	ggcugcggacuguuuggaa	West Nile Virus [WNV]	16464133	100