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Next   PreviousPage - 1 of 5 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) GC Content (%) Cell line PubMed 1574 HIV-1 (IIIB) EU541617 Gag K*2062 GAUUGUACUGAGAGACAGG 91.00 38 Hela 15831707 1660 HIV-1NL4-3 AF324493 Env 7490 CAUGUGGCAGGAAGUAGGA 91.00 42 COS Cells 17176628 1379 HIV-1 (NL4-3) AF324493 LTR 247 GCUUGCUGAAGCGCGCACGG 91.00 56 Hela 18208841 1634 HIV-1 (NL4-3) AF324493 Gag/pol 1749 GACAACAACUCCCUCUCAGA 91.00 40 293 FT cells 20949027 1540 HIV-1 (NL4-3) AF324493 Env 8120 AAGAGAAAUUGACAAUUACAC 91.00 23 U87.CD4.CXCR4 18199654 1632 HIV-1 (NL4-3) AF324493 Gag/pol 1699 GAGACAACAACUCCCUCUCA 91.00 40 293 FT cells 20949027 1306 95MM-yIDU106 N/A Env 7653 GACAAUUGGAGAAGUGAAUUA 91.00 27 Hela 17996047 1629 HIV-1 (NL4-3) AF324493 Gag 1454 AGCUACCAUAAUGAUACAGA 91.00 28 293 FT cells 20949027 1633 HIV-1 (NL4-3) AF324493 Gag/pol 1722 CUGAGAGACAGGCUAAUUU 91.00 33 293 FT cells 20949027 1363 93JP-NH1 AB052995 Pol 4750 CAGCAGUACAAAUGGCAGUAU 91.20 35 Hela 17996047 1426 HIV-1 (NL4-3) AF324493 LTR 509 ACCCACUGCUUAAGCCUCA A 91.50 38 HEK 293a 19497094 1489 HIV-1 (NL4-3) AF324493 Vpu 141 AAGAGCAGAAGACAGUGGCA 91.50 40 HEK 293a 19497094 1455 HIV-1 (NL4-3) AF324493 pol 926 AAGGAUCACCAGCAAUAUUC 91.50 32 HEK 293a 19497094 1496 HIV-1 (NL4-3) AF324493 Vpu 148 GAAGACAGUGGCAAUGAGAGU 91.80 38 HEK 293a 19497094 1647 HIV-1 (NL4-3) AF324493 Gag/pol 3344 GUCAAUACCCCUCCCUUAGU 92.00 40 293 FT cells 20949027 1635 HIV-1 (NL4-3) AF324493 Gag/pol 1753 ACAACUCCCUCUCAGAAGCA 92.00 40 293 FT cells 20949027 1666 HIV-1 (NL4-3) AF324493 LTR NA GCCUGUGCCUCUUCAGUUACC 92.00 46 CD34 cells 15568018 1213 HIV-1 (NL4-3) AF324493 Tat 5997 AAGAGCUCAUCAGAACAGUCA 92.00 35 Hela 17360756 1115 HIV-1 (LAI) K02013 Pol 4811 CAGUGCAGGGGAAAGAAUA 92.00 38 293 T 16948865 1664 HIV-1 (NL4-3) AF324493 Nef 8464 CGGAUCCUUAGCACUUAUC 92.00 38 293T 12186906 1602 HIV-1 (LAI) K02013 Gag 1023 GAACCAAGGGGAAGUGACA 92.00 42 293 T 17715143 1380 HIV-1 (NL4-3) AF324493 LTR 237 GCAGGACUCGGCUUGCUGAA 92.00 48 Hela 18208841 1522 HIV-1 (LAI) K02013 Pol 1910 ACAGGAGCAGAUGAUACAG 92.00 38 293 T 19672247 1084 HIV-1(P89) K02013 Int 4962 AAGGUGAAGGGGCAGUAGUAA 92.00 38 293 T 15750613 1607 HIV-1 (NL4-3) AF324493 tat K*5983 GCGGAGACAGCGACGAAGAGC 92.00 54 293 T 18596982

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