VIRsiRNAdb

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Total number of Results for 16530274 are 8
Results from 0 - 25

siRNA sequence "gaacaucaagcaccgccuaaa" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "gaacaucaagcaccgccuaaa" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1678 " record
Length: 21
GC Content:48 %
Starting position: 9374
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gaacaucaagcaccgccuaaa" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274

siRNA sequence "ggacaucaaggagaaaauuau" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "ggacaucaaggagaaaauuau" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1683 " record
Length: 21
GC Content:33 %
Starting position: 9662
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggacaucaaggagaaaauuau" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274

siRNA sequence "ggaagauccgugagcuccuaa" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "ggaagauccgugagcuccuaa" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1684 " record
Length: 21
GC Content:52 %
Starting position: 9544
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggaagauccgugagcuccuaa" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274

siRNA sequence "ucaggauuuauuuaacauaga" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "ucaggauuuauuuaacauaga" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1681 " record
Length: 21
GC Content:24 %
Starting position: 9506
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ucaggauuuauuuaacauaga" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274

siRNA sequence "guucaccuagauagcccgaua" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "guucaccuagauagcccgaua" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1677 " record
Length: 21
GC Content:48 %
Starting position: 9273
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "guucaccuagauagcccgaua" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274

siRNA sequence "gcuuaggaguuauccggccca" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "gcuuaggaguuauccggccca" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1679 " record
Length: 21
GC Content:57 %
Starting position: 9458
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "gcuuaggaguuauccggccca" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274

siRNA sequence "guccaagcuuaggaguuaucc" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "guccaagcuuaggaguuaucc" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1680 " record
Length: 21
GC Content:48 %
Starting position: 9452
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "guccaagcuuaggaguuaucc" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274

siRNA sequence "ggaggagacacacaccuguau" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "ggaggagacacacaccuguau" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1682 " record
Length: 21
GC Content:52 %
Starting position: 9796
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggaggagacacacaccuguau" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1678	gaacaucaagcaccgccuaaa	Measles Virus	L	Vero/SLAM	Viral Titer	98	16530274	Blast SL	refseqs
virsi1683	ggacaucaaggagaaaauuau	Measles Virus	L	Vero/SLAM	Viral Titer	98	16530274	Blast SL	refseqs
virsi1684	ggaagauccgugagcuccuaa	Measles Virus	L	Vero/SLAM	Viral Titer	97	16530274	Blast SL	refseqs
virsi1681	ucaggauuuauuuaacauaga	Measles Virus	L	Vero/SLAM	Viral Titer	94	16530274	Blast SL	refseqs
virsi1677	guucaccuagauagcccgaua	Measles Virus	L	Vero/SLAM	Viral Titer	90	16530274	Blast SL	refseqs
virsi1679	gcuuaggaguuauccggccca	Measles Virus	L	Vero/SLAM	Viral Titer	90	16530274	Blast SL	refseqs
virsi1680	guccaagcuuaggaguuaucc	Measles Virus	L	Vero/SLAM	Viral Titer	76	16530274	Blast SL	refseqs
virsi1682	ggaggagacacacaccuguau	Measles Virus	L	Vero/SLAM	Viral Titer	46	16530274	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm