VIRsiRNAdb

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Total number of Results for 16757801 are 6
Results from 0 - 25

siRNA sequence "aaggacaugaccuaccguagac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "aaggacaugaccuaccguagac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1292 " record
Length: 22
GC Content:50 %
Starting position: 392
Strain of Virus: TW-PH2_SC27 Isolate
GenBank Acc: AY268070
Transfection Reagent: FuGENE
Incubation Time (Hours):48

Offtargets for "aaggacaugaccuaccguagac" siRNA in Human Genome sequences
See AY268070 at Genbank
Pubmed:16757801
Article:Identification of effective siRNA blocking the expression of SARS viral envelope E and RDRP genes.
Authors:Meng B, Lui YW, Meng S, Cao C, Hu Y.
Journal:Mol Biotechnol. 2006 Jun;33(2):141-8.
Entrez:16757801

siRNA sequence "aaugucaaccgcuucaauguggc" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "aaugucaaccgcuucaauguggc" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1296 " record
Length: 23
GC Content:48 %
Starting position: 119
Strain of Virus: TW-PH2_SC27 Isolate
GenBank Acc: AY268070
Transfection Reagent: FuGENE
Incubation Time (Hours):48

Offtargets for "aaugucaaccgcuucaauguggc" siRNA in Human Genome sequences
See AY268070 at Genbank
Pubmed:16757801
Article:Identification of effective siRNA blocking the expression of SARS viral envelope E and RDRP genes.
Authors:Meng B, Lui YW, Meng S, Cao C, Hu Y.
Journal:Mol Biotechnol. 2006 Jun;33(2):141-8.
Entrez:16757801

siRNA sequence "aaggaguuccugaucuucuggu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "aaggaguuccugaucuucuggu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1295 " record
Length: 22
GC Content:45 %
Starting position: 269
Strain of Virus: TW-PH2_SC27 Isolate
GenBank Acc: AY451891
Transfection Reagent: FuGENE
Incubation Time (Hours):48

Offtargets for "aaggaguuccugaucuucuggu" siRNA in Human Genome sequences
See AY451891 at Genbank
Pubmed:16757801
Article:Identification of effective siRNA blocking the expression of SARS viral envelope E and RDRP genes.
Authors:Meng B, Lui YW, Meng S, Cao C, Hu Y.
Journal:Mol Biotechnol. 2006 Jun;33(2):141-8.
Entrez:16757801

siRNA sequence "aaaccaacgguuuacgucuac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "aaaccaacgguuuacgucuac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1300 " record
Length: 21
GC Content:43 %
Starting position: 220
Strain of Virus: TW-PH2_SC27 Isolate
GenBank Acc: AY451891
Transfection Reagent: FuGENE
Incubation Time (Hours):48

Offtargets for "aaaccaacgguuuacgucuac" siRNA in Human Genome sequences
See AY451891 at Genbank
Pubmed:16757801
Article:Identification of effective siRNA blocking the expression of SARS viral envelope E and RDRP genes.
Authors:Meng B, Lui YW, Meng S, Cao C, Hu Y.
Journal:Mol Biotechnol. 2006 Jun;33(2):141-8.
Entrez:16757801

siRNA sequence "aaauaccacgucgcaauguggc" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "aaauaccacgucgcaauguggc" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1297 " record
Length: 22
GC Content:50 %
Starting position: 222
Strain of Virus: TW-PH2_SC27 Isolate
GenBank Acc: AY268070
Transfection Reagent: FuGENE
Incubation Time (Hours):48

Offtargets for "aaauaccacgucgcaauguggc" siRNA in Human Genome sequences
See AY268070 at Genbank
Pubmed:16757801
Article:Identification of effective siRNA blocking the expression of SARS viral envelope E and RDRP genes.
Authors:Meng B, Lui YW, Meng S, Cao C, Hu Y.
Journal:Mol Biotechnol. 2006 Jun;33(2):141-8.
Entrez:16757801

siRNA sequence "aagcuauucgucacguucgugc" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "aagcuauucgucacguucgugc" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1293 " record
Length: 22
GC Content:50 %
Starting position: 486
Strain of Virus: TW-PH2_SC27 Isolate
GenBank Acc: AY268070
Transfection Reagent: FuGENE
Incubation Time (Hours):48

Offtargets for "aagcuauucgucacguucgugc" siRNA in Human Genome sequences
See AY268070 at Genbank
Pubmed:16757801
Article:Identification of effective siRNA blocking the expression of SARS viral envelope E and RDRP genes.
Authors:Meng B, Lui YW, Meng S, Cao C, Hu Y.
Journal:Mol Biotechnol. 2006 Jun;33(2):141-8.
Entrez:16757801


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1292	aaggacaugaccuaccguagac	SARS Coronavirus	RdRp	NIH 3T3	mRNA	100	16757801	Blast SL	refseqs
virsi1296	aaugucaaccgcuucaauguggc	SARS Coronavirus	RdRp	NIH 3T3	mRNA	100	16757801	Blast SL	refseqs
virsi1295	aaggaguuccugaucuucuggu	SARS Coronavirus	Env	NIH 3T3	mRNA	97	16757801	Blast SL	refseqs
virsi1300	aaaccaacgguuuacgucuac	SARS Coronavirus	Env	NIH 3T3	mRNA	89	16757801	Blast SL	refseqs
virsi1297	aaauaccacgucgcaauguggc	SARS Coronavirus	RdRp	NIH 3T3	mRNA	60	16757801	Blast SL	refseqs
virsi1293	aagcuauucgucacguucgugc	SARS Coronavirus	RdRp	NIH 3T3	mRNA	0	16757801	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm