Browse BY
- Family of Virus
- Virus Name
- Gene Name
- Pubmed Id
- VsiRNAid
Total number of Results for N are 64
Results from 0 - 25
siRNA sequence "aacaugcaggcaagagaagcc" alignment with "Hendra Virus" virus reference Genome sequences
Browse all the records for "Hendra Virus" virus
Browse "virsi1937 " record
Length: 21
GC Content:52 %
Starting position: 1331
Strain of Virus: Hev
GenBank Acc: AF017149
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 21
GC Content:52 %
Starting position: 1331
Strain of Virus: Hev
GenBank Acc: AF017149
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aacaugcaggcaagagaagcc" siRNA in Human Genome sequences
See AF017149 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "aaagagggucaauccauucuu" alignment with "Hendra Virus" virus reference Genome sequences
Browse all the records for "Hendra Virus" virus
Browse "virsi1938 " record
Length: 21
GC Content:38 %
Starting position: 712
Strain of Virus: Hev
GenBank Acc: AF017149
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 21
GC Content:38 %
Starting position: 712
Strain of Virus: Hev
GenBank Acc: AF017149
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aaagagggucaauccauucuu" siRNA in Human Genome sequences
See AF017149 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "aauaucaaucgugguuaucuu" alignment with "Henipavirus" virus reference Genome sequences
Browse all the records for "Henipavirus" virus
Browse "virsi1934 " record
Length: 21
GC Content:29 %
Starting position: 1157
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 21
GC Content:29 %
Starting position: 1157
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aauaucaaucgugguuaucuu" siRNA in Human Genome sequences
See AJ564622 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "aauguucaggcuagagaggca" alignment with "Henipavirus" virus reference Genome sequences
Browse all the records for "Henipavirus" virus
Browse "virsi1936 " record
Length: 21
GC Content:48 %
Starting position: 1331
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 21
GC Content:48 %
Starting position: 1331
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aauguucaggcuagagaggca" siRNA in Human Genome sequences
See AJ564622 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "gggcguuccaaucaacaccaa" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gggcguuccaaucaacaccaa" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1989 " record
Length: 21
GC Content:52 %
Starting position: 213
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Profectin
Incubation Time (Hours):48
Length: 21
GC Content:52 %
Starting position: 213
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Profectin
Incubation Time (Hours):48
Offtargets for "gggcguuccaaucaacaccaa" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:21317844
Article:Identification and characterization of three novel small interference RNAs that effectively down-regulate the isolated nucleocapsid gene expression of SARS coronavirus.
Authors:Cao YL, Wang Y, Guo R, Yang F, Zhang Y, Wang SH, Liu L.
Journal:Molecules. 2011 Feb 11;16(2):1544-58.
Entrez:21317844
Article:Identification and characterization of three novel small interference RNAs that effectively down-regulate the isolated nucleocapsid gene expression of SARS coronavirus.
Authors:Cao YL, Wang Y, Guo R, Yang F, Zhang Y, Wang SH, Liu L.
Journal:Molecules. 2011 Feb 11;16(2):1544-58.
Entrez:21317844
siRNA sequence "gggaccaagaccuaaucagac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gggaccaagaccuaaucagac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1990 " record
Length: 21
GC Content:52 %
Starting position: 863
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Profectin
Incubation Time (Hours):48
Length: 21
GC Content:52 %
Starting position: 863
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Profectin
Incubation Time (Hours):48
Offtargets for "gggaccaagaccuaaucagac" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:21317844
Article:Identification and characterization of three novel small interference RNAs that effectively down-regulate the isolated nucleocapsid gene expression of SARS coronavirus.
Authors:Cao YL, Wang Y, Guo R, Yang F, Zhang Y, Wang SH, Liu L.
Journal:Molecules. 2011 Feb 11;16(2):1544-58.
Entrez:21317844
Article:Identification and characterization of three novel small interference RNAs that effectively down-regulate the isolated nucleocapsid gene expression of SARS coronavirus.
Authors:Cao YL, Wang Y, Guo R, Yang F, Zhang Y, Wang SH, Liu L.
Journal:Molecules. 2011 Feb 11;16(2):1544-58.
Entrez:21317844
siRNA sequence "ggagcuucugcugauucaacu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "ggagcuucugcugauucaacu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1991 " record
Length: 21
GC Content:48 %
Starting position: 1240
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Profectin
Incubation Time (Hours):48
Length: 21
GC Content:48 %
Starting position: 1240
Strain of Virus: HKU-39849
GenBank Acc: AY278491
Transfection Reagent: Profectin
Incubation Time (Hours):48
Offtargets for "ggagcuucugcugauucaacu" siRNA in Human Genome sequences
See AY278491 at Genbank
Pubmed:21317844
Article:Identification and characterization of three novel small interference RNAs that effectively down-regulate the isolated nucleocapsid gene expression of SARS coronavirus.
Authors:Cao YL, Wang Y, Guo R, Yang F, Zhang Y, Wang SH, Liu L.
Journal:Molecules. 2011 Feb 11;16(2):1544-58.
Entrez:21317844
Article:Identification and characterization of three novel small interference RNAs that effectively down-regulate the isolated nucleocapsid gene expression of SARS coronavirus.
Authors:Cao YL, Wang Y, Guo R, Yang F, Zhang Y, Wang SH, Liu L.
Journal:Molecules. 2011 Feb 11;16(2):1544-58.
Entrez:21317844
siRNA sequence "gccugagauuaucguggag" alignment with "Rabies" virus reference Genome sequences
Browse all the records for "Rabies" virus
Browse "virsi2272 " record
Length: 19
GC Content:53 %
Starting position: 123
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):22
Length: 19
GC Content:53 %
Starting position: 123
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):22
Offtargets for "gccugagauuaucguggag" siRNA in Human Genome sequences
Pubmed:17625766
Article:Short-interfering RNAs as antivirals against rabies.
Authors:Brandão PE, Castilho JG, Fahl W, Carnieli P Jr, Oliveira Rde N, Macedo CI, Carrieri ML, Kotait I.
Journal:Braz J Infect Dis. 2007 Apr;11(2):224-5.
Entrez:17625766
Article:Short-interfering RNAs as antivirals against rabies.
Authors:Brandão PE, Castilho JG, Fahl W, Carnieli P Jr, Oliveira Rde N, Macedo CI, Carrieri ML, Kotait I.
Journal:Braz J Infect Dis. 2007 Apr;11(2):224-5.
Entrez:17625766
siRNA sequence "gcacaguugucacugcuuc" alignment with "Rabies" virus reference Genome sequences
Browse all the records for "Rabies" virus
Browse "virsi2273 " record
Length: 19
GC Content:53 %
Starting position: 749
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):22
Length: 19
GC Content:53 %
Starting position: 749
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):22
Offtargets for "gcacaguugucacugcuuc" siRNA in Human Genome sequences
Pubmed:17625766
Article:Short-interfering RNAs as antivirals against rabies.
Authors:Brandão PE, Castilho JG, Fahl W, Carnieli P Jr, Oliveira Rde N, Macedo CI, Carrieri ML, Kotait I.
Journal:Braz J Infect Dis. 2007 Apr;11(2):224-5.
Entrez:17625766
Article:Short-interfering RNAs as antivirals against rabies.
Authors:Brandão PE, Castilho JG, Fahl W, Carnieli P Jr, Oliveira Rde N, Macedo CI, Carrieri ML, Kotait I.
Journal:Braz J Infect Dis. 2007 Apr;11(2):224-5.
Entrez:17625766
siRNA sequence "gacagcuguuccucacucg" alignment with "Rabies" virus reference Genome sequences
Browse all the records for "Rabies" virus
Browse "virsi2274 " record
Length: 19
GC Content:58 %
Starting position: 903
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):22
Length: 19
GC Content:58 %
Starting position: 903
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):22
Offtargets for "gacagcuguuccucacucg" siRNA in Human Genome sequences
Pubmed:17625766
Article:Short-interfering RNAs as antivirals against rabies.
Authors:Brandão PE, Castilho JG, Fahl W, Carnieli P Jr, Oliveira Rde N, Macedo CI, Carrieri ML, Kotait I.
Journal:Braz J Infect Dis. 2007 Apr;11(2):224-5.
Entrez:17625766
Article:Short-interfering RNAs as antivirals against rabies.
Authors:Brandão PE, Castilho JG, Fahl W, Carnieli P Jr, Oliveira Rde N, Macedo CI, Carrieri ML, Kotait I.
Journal:Braz J Infect Dis. 2007 Apr;11(2):224-5.
Entrez:17625766
siRNA sequence "gcaccagacacaccaauaa" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "gcaccagacacaccaauaa" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2073 " record
Length: 19
GC Content:47 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:47 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gcaccagacacaccaauaa" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "gaagcaaagcagaaaguuu" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "gaagcaaagcagaaaguuu" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2075 " record
Length: 19
GC Content:37 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:37 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gaagcaaagcagaaaguuu" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "cuucaagggauucaccuaa" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "cuucaagggauucaccuaa" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2067 " record
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "cuucaagggauucaccuaa" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "gccuucagcaccagacaca" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "gccuucagcaccagacaca" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2072 " record
Length: 19
GC Content:58 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:58 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gccuucagcaccagacaca" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "gguucggaugguucgggaa" alignment with "Measles Virus" virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1687 " record
Length: 19
GC Content:58 %
Starting position: 480
GenBank Acc: MVU03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 19
GC Content:58 %
Starting position: 480
GenBank Acc: MVU03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "gguucggaugguucgggaa" siRNA in Human Genome sequences
See MVU03668 at Genbank
Pubmed:18634829
Article:Identification and mapping of a region on the mRNA of Morbillivirus nucleoprotein susceptible to RNA interference.
Authors:Keita D, Servan de Almeida R, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Nov;80(2):158-67. Epub 2008 Jul 15.
Entrez:18634829
Article:Identification and mapping of a region on the mRNA of Morbillivirus nucleoprotein susceptible to RNA interference.
Authors:Keita D, Servan de Almeida R, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Nov;80(2):158-67. Epub 2008 Jul 15.
Entrez:18634829
siRNA sequence "gguucggaugguucgggaa" alignment with "Measles Virus" virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1939 " record
Length: 19
GC Content:58 %
Starting position: 428
Strain of Virus: MMV
GenBank Acc: U03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):96
Length: 19
GC Content:58 %
Starting position: 428
Strain of Virus: MMV
GenBank Acc: U03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):96
Offtargets for "gguucggaugguucgggaa" siRNA in Human Genome sequences
See U03668 at Genbank
Pubmed:18394725
Article:Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
Authors:de Almeida RS, Keita D, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Jul;79(1):37-48. Epub 2008 Mar 11.
Entrez:18394725
Article:Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
Authors:de Almeida RS, Keita D, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Jul;79(1):37-48. Epub 2008 Mar 11.
Entrez:18394725
siRNA sequence "ggucaaacaaugcuaaggu" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "ggucaaacaaugcuaaggu" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2076 " record
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "ggucaaacaaugcuaaggu" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "agguucggaugguucggga" alignment with "Measles Virus" virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1686 " record
Length: 19
GC Content:58 %
Starting position: 479
GenBank Acc: MVU03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 19
GC Content:58 %
Starting position: 479
GenBank Acc: MVU03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "agguucggaugguucggga" siRNA in Human Genome sequences
See MVU03668 at Genbank
Pubmed:18634829
Article:Identification and mapping of a region on the mRNA of Morbillivirus nucleoprotein susceptible to RNA interference.
Authors:Keita D, Servan de Almeida R, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Nov;80(2):158-67. Epub 2008 Jul 15.
Entrez:18634829
Article:Identification and mapping of a region on the mRNA of Morbillivirus nucleoprotein susceptible to RNA interference.
Authors:Keita D, Servan de Almeida R, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Nov;80(2):158-67. Epub 2008 Jul 15.
Entrez:18634829
siRNA sequence "ggagcuuagcauuguucaa" alignment with "Measles Virus" virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1948 " record
Length: 19
GC Content:42 %
Starting position: 17
Strain of Virus: MMV
GenBank Acc: U03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):96
Length: 19
GC Content:42 %
Starting position: 17
Strain of Virus: MMV
GenBank Acc: U03668
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):96
Offtargets for "ggagcuuagcauuguucaa" siRNA in Human Genome sequences
See U03668 at Genbank
Pubmed:18394725
Article:Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
Authors:de Almeida RS, Keita D, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Jul;79(1):37-48. Epub 2008 Mar 11.
Entrez:18394725
Article:Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
Authors:de Almeida RS, Keita D, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Jul;79(1):37-48. Epub 2008 Mar 11.
Entrez:18394725
siRNA sequence "agguucggaugguucgaga" alignment with "Measles Virus" virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1940 " record
Length: 19
GC Content:53 %
Starting position: 534
Strain of Virus: MMV
GenBank Acc: AF266288
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):96
Length: 19
GC Content:53 %
Starting position: 534
Strain of Virus: MMV
GenBank Acc: AF266288
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):96
Offtargets for "agguucggaugguucgaga" siRNA in Human Genome sequences
See AF266288 at Genbank
Pubmed:18394725
Article:Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
Authors:de Almeida RS, Keita D, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Jul;79(1):37-48. Epub 2008 Mar 11.
Entrez:18394725
Article:Structure and sequence motifs of siRNA linked with in vitro down-regulation of morbillivirus gene expression.
Authors:de Almeida RS, Keita D, Libeau G, Albina E.
Journal:Antiviral Res. 2008 Jul;79(1):37-48. Epub 2008 Mar 11.
Entrez:18394725
siRNA sequence "ggcaucguauggguugcaacu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "ggcaucguauggguugcaacu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1366 " record
Length: 21
GC Content:52 %
Starting position: 28492
Strain of Virus: CUHK-W1
GenBank Acc: AY278554
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):192
Length: 21
GC Content:52 %
Starting position: 28492
Strain of Virus: CUHK-W1
GenBank Acc: AY278554
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):192
Offtargets for "ggcaucguauggguugcaacu" siRNA in Human Genome sequences
See AY278554 at Genbank
Pubmed:15848179
Article:Small interfering RNA inhibits SARS-CoV nucleocapsid gene expression in cultured cells and mouse muscles.
Authors:Zhao P, Qin ZL, Ke JS, Lu Y, Liu M, Pan W, Zhao LJ, Cao J, Qi ZT.
Journal:FEBS Lett. 2005 Apr 25;579(11):2404-10.
Entrez:15848179
Article:Small interfering RNA inhibits SARS-CoV nucleocapsid gene expression in cultured cells and mouse muscles.
Authors:Zhao P, Qin ZL, Ke JS, Lu Y, Liu M, Pan W, Zhao LJ, Cao J, Qi ZT.
Journal:FEBS Lett. 2005 Apr 25;579(11):2404-10.
Entrez:15848179
siRNA sequence "ggcaucguauggguugcaacu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "ggcaucguauggguugcaacu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1372 " record
Length: 21
GC Content:52 %
Starting position: 28492
Strain of Virus: CUHK-W1
GenBank Acc: AY278554
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:52 %
Starting position: 28492
Strain of Virus: CUHK-W1
GenBank Acc: AY278554
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "ggcaucguauggguugcaacu" siRNA in Human Genome sequences
See AY278554 at Genbank
Pubmed:15848179
Article:Small interfering RNA inhibits SARS-CoV nucleocapsid gene expression in cultured cells and mouse muscles.
Authors:Zhao P, Qin ZL, Ke JS, Lu Y, Liu M, Pan W, Zhao LJ, Cao J, Qi ZT.
Journal:FEBS Lett. 2005 Apr 25;579(11):2404-10.
Entrez:15848179
Article:Small interfering RNA inhibits SARS-CoV nucleocapsid gene expression in cultured cells and mouse muscles.
Authors:Zhao P, Qin ZL, Ke JS, Lu Y, Liu M, Pan W, Zhao LJ, Cao J, Qi ZT.
Journal:FEBS Lett. 2005 Apr 25;579(11):2404-10.
Entrez:15848179
siRNA sequence "ggaggaacuuagauucccu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "ggaggaacuuagauucccu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1324 " record
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24
Offtargets for "ggaggaacuuagauucccu" siRNA in Human Genome sequences
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181
siRNA sequence "gauaauggaccccaaucaaac" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "gauaauggaccccaaucaaac" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1384 " record
Length: 21
GC Content:43 %
Starting position: 28126
GenBank Acc: NC_004733
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:43 %
Starting position: 28126
GenBank Acc: NC_004733
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gauaauggaccccaaucaaac" siRNA in Human Genome sequences
See NC_004733 at Genbank
Pubmed:15780182
Article:Inhibition of genes expression of SARS coronavirus by synthetic small interfering RNAs.
Authors:Shi Y, Yang DH, Xiong J, Jia J, Huang B, Jin YX.
Journal:Cell Res. 2005 Mar;15(3):193-200.
Entrez:15780182
Article:Inhibition of genes expression of SARS coronavirus by synthetic small interfering RNAs.
Authors:Shi Y, Yang DH, Xiong J, Jia J, Huang B, Jin YX.
Journal:Cell Res. 2005 Mar;15(3):193-200.
Entrez:15780182
siRNA sequence "ggaggaacuuagauucccu" alignment with "SARS Coronavirus" virus reference Genome sequences
siRNA sequence matching with "ggaggaacuuagauucccu" SARS Coronavirus" Virus reference Genome sequences
Browse all the records for "SARS Coronavirus" virus
Browse "virsi1318 " record
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24
Length: 19
GC Content:47 %
Starting position: 28493
Transfection Reagent: Sofast
Incubation Time (Hours):24
Offtargets for "ggaggaacuuagauucccu" siRNA in Human Genome sequences
Pubmed:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181
Article:Inhibition of SARS-CoV gene expression by adenovirus-delivered small hairpin RNA.
Authors:Zhang X, Wu K, Yue X, Zhu Y, Wu J.
Journal:Intervirology. 2007;50(2):63-70. Epub 2006 Nov 30.
Entrez:17139181
| VIRsiRNAid | siRNA Sequence |  Virus_Name | Target Region | Cell Line | Test Object | Efficacy | PMID | Offtarget | Align With | ALIGN0 Result |
|---|---|---|---|---|---|---|---|---|---|---|
| virsi1937 | aacaugcaggcaagagaagcc | Hendra Virus |  SL | refseqs |  | |||||
| virsi1938 | aaagagggucaauccauucuu | Hendra Virus |  SL | refseqs |  | |||||
| virsi1934 | aauaucaaucgugguuaucuu | Henipavirus |  SL | refseqs |  | |||||
| virsi1936 | aauguucaggcuagagaggca | Henipavirus | SL | refseqs |  | |||||
| virsi1989 | gggcguuccaaucaacaccaa | SARS Coronavirus | SL | refseqs |  | |||||
| virsi1990 | gggaccaagaccuaaucagac | SARS Coronavirus | SL | refseqs |  | |||||
| virsi1991 | ggagcuucugcugauucaacu | SARS Coronavirus | SL | refseqs |  | |||||
| virsi2272 | gccugagauuaucguggag | Rabies | SL | refseqs |  | |||||
| virsi2273 | gcacaguugucacugcuuc | Rabies | SL | refseqs |  | |||||
| virsi2274 | gacagcuguuccucacucg | Rabies | SL | refseqs |  | |||||
| virsi2073 | gcaccagacacaccaauaa | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2075 | gaagcaaagcagaaaguuu | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2067 | cuucaagggauucaccuaa | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2072 | gccuucagcaccagacaca | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi1687 | gguucggaugguucgggaa | Measles Virus | SL | refseqs |  | |||||
| virsi1939 | gguucggaugguucgggaa | Measles Virus | SL | refseqs |  | |||||
| virsi2076 | ggucaaacaaugcuaaggu | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi1686 | agguucggaugguucggga | Measles Virus | SL | refseqs |  | |||||
| virsi1948 | ggagcuuagcauuguucaa | Measles Virus | SL | refseqs |  | |||||
| virsi1940 | agguucggaugguucgaga | Measles Virus | SL | refseqs |  | |||||
| virsi1366 | ggcaucguauggguugcaacu | SARS Coronavirus | SL | refseqs |  | |||||
| virsi1372 | ggcaucguauggguugcaacu | SARS Coronavirus | SL | refseqs |  | |||||
| virsi1324 | ggaggaacuuagauucccu | SARS Coronavirus | SL | refseqs |  | |||||
| virsi1384 | gauaauggaccccaaucaaac | SARS Coronavirus | SL | refseqs |  | |||||
| virsi1318 | ggaggaacuuagauucccu | SARS Coronavirus | SL | refseqs |  |
: siRNA specific for both strands: siRNA specific for only one strands: siRNA Not specific SL: siRNA seedlocator algorithm