This section provides the option to download all the sequences in various functional categories which are present in SATPdb using following links along with their description. The sequences are in in fasta format. To download the sequences click on the respective link (blue color and underlined).
|Antibacterial Peptides||Anticancer Peptides||Antifungal Peptides||Toxic Peptides|
|Anti Hypertensive Peptides||Antimicrobial Peptides||Antiparasitic Peptides|
|Antiviral Peptides||Cell cell Communication||Drug Delivery|
This section provides the option to download the structures which are annotated in SATPdb using following links along with their description. The structures are compressed in tgz format. Use following command (in linux) to uncompress the tgz file format (command: 'tar -xzf filename.tgz') and in windows use 'winrar' utility. To download the structures click on the respective link (blue color and underlined).
PDB structures : Peptides with exact sequence match to a structure already present in PDB is assigned the same structure as that of PDB.
PEPstrMOD structures : Peptides with length less than or equal to 30 amino acids were predicted using PEPstrMOD method (in parallel communication).
Homology models : Peptides with length greater than 30 residues and having homologous templates (with probability>=70%) were predicted using MODELLER.
I-TASSER structures : Peptides with length greater than 30 residues and not having any homologous templates (with probability>=70%) were predicted using I-TASSER suite.
All SATPdb structures : All the peptides of SATPdb which are structurally annotated (except some peptides with complex chemical modifications) can be downloaded using this link.