This module allow users to perform structure based similarity against SATPdb. User may submit tertiary structure of their peptide to search therapeutic peptides having similar structure. The page can accept the input in major file formats (PDB, Smiles). User can also draw their stucture using Marvin applet. In addition user may select desired search options (searching is performed using JCsearch). The PDB format is set as default format.
PDB search Page
This module had been designed with the aim to provide virtual screening facility to scientific community. Using this tool, users can screen their peptide library and identify similar or exact peptides from various databases. The input for this module could be provided by 1) pasting the peptide structure in defined text area OR 2) Upload the structure file in standard PDB format. For more information click HELP