Browse BY
- Family of Virus
- Virus Name
- Gene Name
- Pubmed Id
- VsiRNAid
Total number of Results for L are 48
Results from 0 - 25
siRNA sequence "uuuccuggcuaguggauuu" alignment with "La Crosse Virus" virus reference Genome sequences
siRNA sequence matching with "uuuccuggcuaguggauuu" La Crosse Virus" Virus reference Genome sequences
Browse all the records for "La Crosse Virus" virus
Browse "virsi1424 " record
Length: 19
GC Content:42 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Length: 19
GC Content:42 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Offtargets for "uuuccuggcuaguggauuu" siRNA in Human Genome sequences
See NC_004110 at Genbank
Pubmed:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
siRNA sequence "aauuagcguuagguagaguaauauacg" alignment with "Henipavirus" virus reference Genome sequences
siRNA sequence matching with "aauuagcguuagguagaguaauauacg" Henipavirus" Virus reference Genome sequences
Browse all the records for "Henipavirus" virus
Browse "virsi1929 " record
Length: 27
GC Content:33 %
Starting position: 15030
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 27
GC Content:33 %
Starting position: 15030
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aauuagcguuagguagaguaauauacg" siRNA in Human Genome sequences
See AJ564622 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "aaaccuucuuguaacaucuuauaugau" alignment with "Henipavirus" virus reference Genome sequences
siRNA sequence matching with "aaaccuucuuguaacaucuuauaugau" Henipavirus" Virus reference Genome sequences
Browse all the records for "Henipavirus" virus
Browse "virsi1930 " record
Length: 27
GC Content:26 %
Starting position: 16286
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 27
GC Content:26 %
Starting position: 16286
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aaaccuucuuguaacaucuuauaugau" siRNA in Human Genome sequences
See AJ564622 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "aaagaaguacuaucagauugaccaacc" alignment with "Henipavirus" virus reference Genome sequences
siRNA sequence matching with "aaagaaguacuaucagauugaccaacc" Henipavirus" Virus reference Genome sequences
Browse all the records for "Henipavirus" virus
Browse "virsi1931 " record
Length: 27
GC Content:37 %
Starting position: 17609
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 27
GC Content:37 %
Starting position: 17609
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aaagaaguacuaucagauugaccaacc" siRNA in Human Genome sequences
See AJ564622 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "aaacauggacuauagcaacuauccccu" alignment with "Henipavirus" virus reference Genome sequences
siRNA sequence matching with "aaacauggacuauagcaacuauccccu" Henipavirus" Virus reference Genome sequences
Browse all the records for "Henipavirus" virus
Browse "virsi1932 " record
Length: 27
GC Content:41 %
Starting position: 13822
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 27
GC Content:41 %
Starting position: 13822
Strain of Virus: Niv
GenBank Acc: AJ564622
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "aaacauggacuauagcaacuauccccu" siRNA in Human Genome sequences
See AJ564622 at Genbank
Pubmed:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
Article:Inhibition of Henipavirus infection by RNA interference.
Authors:Mungall BA, Schopman NC, Lambeth LS, Doran TJ.
Journal:Antiviral Res. 2008 Dec;80(3):324-31. Epub 2008 Aug 5.
Entrez:18687361
siRNA sequence "aauauacgggaguccucaacg" alignment with "La Crosse Virus" virus reference Genome sequences
siRNA sequence matching with "aauauacgggaguccucaacg" La Crosse Virus" Virus reference Genome sequences
Browse all the records for "La Crosse Virus" virus
Browse "virsi1426 " record
Length: 21
GC Content:48 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Length: 21
GC Content:48 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Offtargets for "aauauacgggaguccucaacg" siRNA in Human Genome sequences
See NC_004110 at Genbank
Pubmed:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
siRNA sequence "agccagcacgcuacaugauu" alignment with "La Crosse Virus" virus reference Genome sequences
siRNA sequence matching with "agccagcacgcuacaugauu" La Crosse Virus" Virus reference Genome sequences
Browse all the records for "La Crosse Virus" virus
Browse "virsi1427 " record
Length: 20
GC Content:50 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Length: 20
GC Content:50 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Offtargets for "agccagcacgcuacaugauu" siRNA in Human Genome sequences
See NC_004110 at Genbank
Pubmed:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
siRNA sequence "aagacacaaccacuugcgga" alignment with "La Crosse Virus" virus reference Genome sequences
siRNA sequence matching with "aagacacaaccacuugcgga" La Crosse Virus" Virus reference Genome sequences
Browse all the records for "La Crosse Virus" virus
Browse "virsi1429 " record
Length: 20
GC Content:50 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Length: 20
GC Content:50 %
GenBank Acc: NC_004110
Transfection Reagent: siPORT
Incubation Time (Hours):48
Offtargets for "aagacacaaccacuugcgga" siRNA in Human Genome sequences
See NC_004110 at Genbank
Pubmed:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
Article:La Crosse virus nonstructural protein NSs counteracts the effects of short interfering RNA.
Authors:Soldan SS, Plassmeyer ML, Matukonis MK, González-Scarano F.
Journal:J Virol. 2005 Jan;79(1):234-44.
Entrez:15596819
siRNA sequence "ggcccggauggucauuuaa" alignment with "Lymphocytic Choriomeningitis Virus" virus reference Genome sequences
siRNA sequence matching with "ggcccggauggucauuuaa" Lymphocytic Choriomeningitis Virus" Virus reference Genome sequences
Browse all the records for "Lymphocytic Choriomeningitis Virus" virus
Browse "virsi2303 " record
Length: 19
GC Content:53 %
GenBank Acc: NC_004291
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Length: 19
GC Content:53 %
GenBank Acc: NC_004291
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):24
Offtargets for "ggcccggauggucauuuaa" siRNA in Human Genome sequences
See NC_004291 at Genbank
Pubmed:16103158
Article:RNA interference-mediated virus clearance from cells both acutely and chronically infected with the prototypic arenavirus lymphocytic choriomeningitis virus.
Authors:Sánchez AB, Perez M, Cornu T, de la Torre JC.
Journal:J Virol. 2005 Sep;79(17):11071-81.
Entrez:16103158
Article:RNA interference-mediated virus clearance from cells both acutely and chronically infected with the prototypic arenavirus lymphocytic choriomeningitis virus.
Authors:Sánchez AB, Perez M, Cornu T, de la Torre JC.
Journal:J Virol. 2005 Sep;79(17):11071-81.
Entrez:16103158
siRNA sequence "gaacaucaagcaccgccuaaa" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "gaacaucaagcaccgccuaaa" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1678 " record
Length: 21
GC Content:48 %
Starting position: 9374
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:48 %
Starting position: 9374
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gaacaucaagcaccgccuaaa" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
siRNA sequence "ggacaucaaggagaaaauuau" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "ggacaucaaggagaaaauuau" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1683 " record
Length: 21
GC Content:33 %
Starting position: 9662
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:33 %
Starting position: 9662
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "ggacaucaaggagaaaauuau" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
siRNA sequence "ggaagauccgugagcuccuaa" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "ggaagauccgugagcuccuaa" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1684 " record
Length: 21
GC Content:52 %
Starting position: 9544
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:52 %
Starting position: 9544
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "ggaagauccgugagcuccuaa" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
siRNA sequence "ucaggauuuauuuaacauaga" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "ucaggauuuauuuaacauaga" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1681 " record
Length: 21
GC Content:24 %
Starting position: 9506
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:24 %
Starting position: 9506
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "ucaggauuuauuuaacauaga" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
siRNA sequence "guucaccuagauagcccgaua" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "guucaccuagauagcccgaua" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1677 " record
Length: 21
GC Content:48 %
Starting position: 9273
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:48 %
Starting position: 9273
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "guucaccuagauagcccgaua" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
siRNA sequence "gcuuaggaguuauccggccca" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "gcuuaggaguuauccggccca" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1679 " record
Length: 21
GC Content:57 %
Starting position: 9458
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:57 %
Starting position: 9458
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gcuuaggaguuauccggccca" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
siRNA sequence "gggaaagaaagagaauuaa" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "gggaaagaaagagaauuaa" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2101 " record
Length: 19
GC Content:32 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:32 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gggaaagaaagagaauuaa" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "ccaacuguuaacauggaaa" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "ccaacuguuaacauggaaa" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2098 " record
Length: 19
GC Content:37 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:37 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "ccaacuguuaacauggaaa" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "gcaugccauugguguggaa" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "gcaugccauugguguggaa" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2117 " record
Length: 19
GC Content:53 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:53 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gcaugccauugguguggaa" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "ccauugguguggaauauua" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "ccauugguguggaauauua" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2118 " record
Length: 19
GC Content:37 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:37 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "ccauugguguggaauauua" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "ccugggaaaugcagagaua" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "ccugggaaaugcagagaua" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2122 " record
Length: 19
GC Content:47 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:47 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "ccugggaaaugcagagaua" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "guccaagcuuaggaguuaucc" alignment with "Measles Virus" virus reference Genome sequences
siRNA sequence matching with "guccaagcuuaggaguuaucc" Measles Virus" Virus reference Genome sequences
Browse all the records for "Measles Virus" virus
Browse "virsi1680 " record
Length: 21
GC Content:48 %
Starting position: 9452
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:48 %
Starting position: 9452
Strain of Virus: Ichinose-B95a
GenBank Acc: AB016162
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "guccaagcuuaggaguuaucc" siRNA in Human Genome sequences
See AB016162 at Genbank
Pubmed:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
Article:Inhibition of measles virus and subacute sclerosing panencephalitis virus by RNA interference.
Authors:Otaki M, Sada K, Kadoya H, Nagano-Fujii M, Hotta H.
Journal:Antiviral Res. 2006 Jul;70(3):105-11. Epub 2006 Feb 13.
Entrez:16530274
siRNA sequence "ccagcuuauaggacaacaa" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "ccagcuuauaggacaacaa" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2115 " record
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "ccagcuuauaggacaacaa" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "ccuguuuauaacagacaaa" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "ccuguuuauaacagacaaa" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2113 " record
Length: 19
GC Content:32 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:32 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "ccuguuuauaacagacaaa" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "gggacuugauacacagaau" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "gggacuugauacacagaau" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2121 " record
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:42 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gggacuugauacacagaau" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
siRNA sequence "gcaugaaguacccuggauu" alignment with "Human Metapneumovirus" virus reference Genome sequences
siRNA sequence matching with "gcaugaaguacccuggauu" Human Metapneumovirus" Virus reference Genome sequences
Browse all the records for "Human Metapneumovirus" virus
Browse "virsi2119 " record
Length: 19
GC Content:47 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:47 %
Strain of Virus: A1 Clinical Strain (C-85473)
GenBank Acc: AY297748
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gcaugaaguacccuggauu" siRNA in Human Genome sequences
See AY297748 at Genbank
Pubmed:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
Article:Inhibition of human metapneumovirus replication by small interfering RNA.
Authors:Deffrasnes C, Cavanagh MH, Goyette N, Cui K, Ge Q, Seth S, Templin MV, Quay SC, Johnson PH, Boivin G.
Journal:Antivir Ther. 2008;13(6):821-32.
Entrez:18839783
| VIRsiRNAid | siRNA Sequence |  Virus_Name | Target Region | Cell Line | Test Object | Efficacy | PMID | Offtarget | Align With | ALIGN0 Result |
|---|---|---|---|---|---|---|---|---|---|---|
| virsi1424 | uuuccuggcuaguggauuu | La Crosse Virus |  SL | refseqs |  | |||||
| virsi1929 | aauuagcguuagguagaguaauauacg | Henipavirus |  SL | refseqs |  | |||||
| virsi1930 | aaaccuucuuguaacaucuuauaugau | Henipavirus | SL | refseqs |  | |||||
| virsi1931 | aaagaaguacuaucagauugaccaacc | Henipavirus | SL | refseqs |  | |||||
| virsi1932 | aaacauggacuauagcaacuauccccu | Henipavirus | SL | refseqs |  | |||||
| virsi1426 | aauauacgggaguccucaacg | La Crosse Virus | SL | refseqs |  | |||||
| virsi1427 | agccagcacgcuacaugauu | La Crosse Virus | SL | refseqs |  | |||||
| virsi1429 | aagacacaaccacuugcgga | La Crosse Virus | SL | refseqs |  | |||||
| virsi2303 | ggcccggauggucauuuaa | Lymphocytic Choriomeningitis Virus | SL | refseqs |  | |||||
| virsi1678 | gaacaucaagcaccgccuaaa | Measles Virus | SL | refseqs |  | |||||
| virsi1683 | ggacaucaaggagaaaauuau | Measles Virus | SL | refseqs |  | |||||
| virsi1684 | ggaagauccgugagcuccuaa | Measles Virus | SL | refseqs |  | |||||
| virsi1681 | ucaggauuuauuuaacauaga | Measles Virus |  SL | refseqs |  | |||||
| virsi1677 | guucaccuagauagcccgaua | Measles Virus | SL | refseqs |  | |||||
| virsi1679 | gcuuaggaguuauccggccca | Measles Virus | SL | refseqs |  | |||||
| virsi2101 | gggaaagaaagagaauuaa | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2098 | ccaacuguuaacauggaaa | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2117 | gcaugccauugguguggaa | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2118 | ccauugguguggaauauua | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2122 | ccugggaaaugcagagaua | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi1680 | guccaagcuuaggaguuaucc | Measles Virus | SL | refseqs |  | |||||
| virsi2115 | ccagcuuauaggacaacaa | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2113 | ccuguuuauaacagacaaa | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2121 | gggacuugauacacagaau | Human Metapneumovirus | SL | refseqs |  | |||||
| virsi2119 | gcaugaaguacccuggauu | Human Metapneumovirus | SL | refseqs |  |
: siRNA specific for both strands: siRNA specific for only one strands: siRNA Not specific SL: siRNA seedlocator algorithm