VIRsiRNAdb

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Total number of Results for Epstein-Barr Virus [EBV] are 43
Results from 0 - 25

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siRNA sequence "acguccaaguugcauuggc" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "acguccaaguugcauuggc" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1853 " record
Length: 19
GC Content:53 %
Starting position: 108174
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "acguccaaguugcauuggc" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "ggagguuccaacccgaaau" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggagguuccaacccgaaau" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1854 " record
Length: 19
GC Content:53 %
Starting position: 109363
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggagguuccaacccgaaau" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "ggacuaccgacgaaggaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggacuaccgacgaaggaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1855 " record
Length: 19
GC Content:58 %
Starting position: 109436
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggacuaccgacgaaggaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:16343579
Article:siRNAs against the Epstein Barr virus latency replication factor, EBNA1, inhibit its function and growth of EBV-dependent tumor cells.
Authors:Yin Q, Flemington EK.
Journal:Virology. 2006 Mar 15;346(2):385-93. Epub 2005 Dec 15.
Entrez:16343579

siRNA sequence "aacugguggacucuauugg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aacugguggacucuauugg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1857 " record
Length: 19
GC Content:47 %
Starting position: 1044
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine

Offtargets for "aacugguggacucuauugg" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15013447
Article:Suppression of Epstein-Barr virus-encoded latent membrane protein-1 by RNA interference inhibits the metastatic potential of nasopharyngeal carcinoma cells.
Authors:Li XP, Li G, Peng Y, Kung HF, Lin MC.
Journal:Biochem Biophys Res Commun. 2004 Feb 27;315(1):212-8.
Entrez:15013447

siRNA sequence "caacagcuagcagacauug" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "caacagcuagcagacauug" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1859 " record
Length: 19
GC Content:47 %
Starting position: 415
GenBank Acc: EU340368
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "caacagcuagcagacauug" siRNA in Human Genome sequences
See EU340368 at Genbank
Pubmed:15166418
Article:Inhibition of the Epstein-Barr virus lytic cycle by Zta-targeted RNA interference.
Authors:Chang Y, Chang SS, Lee HH, Doong SL, Takada K, Tsai CH.
Journal:J Gen Virol. 2004 Jun;85(Pt 6):1371-9.
Entrez:15166418

siRNA sequence "ggaauuugcacggacaggc" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggaauuugcacggacaggc" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1856 " record
Length: 19
GC Content:58 %
Starting position: 773
GenBank Acc: EU910134
Transfection Reagent: Lipofectamine 2000

Offtargets for "ggaauuugcacggacaggc" siRNA in Human Genome sequences
See EU910134 at Genbank
Pubmed:16458115
Article:siRNA targeting LMP1-induced apoptosis in EBV-positive lymphoma cells is associated with inhibition of telomerase activity and expression.
Authors:Mei YP, Zhu XF, Zhou JM, Huang H, Deng R, Zeng YX.
Journal:Cancer Lett. 2006 Feb 8;232(2):189-98.
Entrez:16458115

siRNA sequence "gccuguccgugcaaauucc" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gccuguccgugcaaauucc" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1885 " record
Length: 19
GC Content:58 %
Starting position: 371
Strain of Virus: EBV
GenBank Acc: EU000388
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gccuguccgugcaaauucc" siRNA in Human Genome sequences
See EU000388 at Genbank
Pubmed:20338061
Article:Epstein-Barr virus encoded latent membrane protein 1 regulates mTOR signaling pathway genes which predict poor prognosis of nasopharyngeal carcinoma.
Authors:Chen J, Hu CF, Hou JH, Shao Q, Yan LX, Zhu XF, Zeng YX, Shao JY.
Journal:J Transl Med. 2010 Mar 26;8:30.
Entrez:20338061

siRNA sequence "ccucuccucuuccauaggc" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccucuccucuuccauaggc" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1860 " record
Length: 19
GC Content:58 %
Starting position: 612
GenBank Acc: X66863
Incubation Time (Hours):60

Offtargets for "ccucuccucuuccauaggc" siRNA in Human Genome sequences
See X66863 at Genbank
Pubmed:16865275
Article:Recombinant adeno-associated virus mediated RNA interference inhibits metastasis of nasopharyngeal cancer cells in vivo and in vitro by suppression of Epstein-Barr virus encoded LMP-1.
Authors:Li X, Liu X, Li CY, Ding Y, Chau D, Li G, Kung HF, Lin MC, Peng Y.
Journal:Int J Oncol. 2006 Sep;29(3):595-603.
Entrez:16865275

siRNA sequence "guggacagagaaggucucu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guggacagagaaggucucu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1850 " record
Length: 19
GC Content:53 %
Starting position: 622
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):36

Offtargets for "guggacagagaaggucucu" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532

siRNA sequence "guaagaccucccuuuacaaccuaag" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guaagaccucccuuuacaaccuaag" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1873 " record
Length: 25
GC Content:44 %
Starting position: 109487
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "guaagaccucccuuuacaaccuaag" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcaucguggucaaggagguuccaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcaucguggucaaggagguuccaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1871 " record
Length: 25
GC Content:56 %
Starting position: 109350
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcaucguggucaaggagguuccaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "ccaauagaguccaccaguu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccaauagaguccaccaguu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1849 " record
Length: 19
GC Content:47 %
Starting position: 1044
GenBank Acc: EU910136
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ccaauagaguccaccaguu" siRNA in Human Genome sequences
See EU910136 at Genbank
Pubmed:15041532
Article:Effect of inhibition of EBV-encoded latent membrane protein-1 by small interfering RNA on EBV-positive nasopharyngeal carcinoma cell growth.
Authors:Li G, Li XP, Peng Y, Liu X, Li XH.
Journal:Di Yi Jun Yi Da Xue Xue Bao. 2004 Mar;24(3):241-6.
Entrez:15041532

siRNA sequence "ggaauuugcacggacaggc" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ggaauuugcacggacaggc" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1858 " record
Length: 19
GC Content:58 %
Starting position: 773
GenBank Acc: EU910134
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ggaauuugcacggacaggc" siRNA in Human Genome sequences
See EU910134 at Genbank
Pubmed:17507800
Article:Silencing of LMP1 induces cell cycle arrest and enhances chemosensitivity through inhibition of AKT signaling pathway in EBV-positive nasopharyngeal carcinoma cells.
Authors:Mei YP, Zhou JM, Wang Y, Huang H, Deng R, Feng GK, Zeng YX, Zhu XF.
Journal:Cell Cycle. 2007 Jun 1;6(11):1379-85. Epub 2007 Jun 11.
Entrez:17507800

siRNA sequence "aagagaccuucucuguccacu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aagagaccuucucuguccacu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1883 " record
Length: 21
GC Content:48 %
Starting position: 291
Strain of Virus: EBV
GenBank Acc: NC_007605
Transfection Reagent: Oligofectamine
Incubation Time (Hours):48

Offtargets for "aagagaccuucucuguccacu" siRNA in Human Genome sequences
See NC_007605 at Genbank
Pubmed:18230756
Article:EBV LMP2A affects LMP1-mediated NF-kappaB signaling and survival of lymphoma cells by regulating TRAF2 expression.
Authors:Guasparri I, Bubman D, Cesarman E.
Journal:Blood. 2008 Apr 1;111(7):3813-20. Epub 2008 Jan 29. Erratum in: Blood. 2008 Jul 15;112(2):452.
Entrez:18230756

siRNA sequence "aacucccaauauccaucugcu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aacucccaauauccaucugcu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1884 " record
Length: 21
GC Content:43 %
Starting position: 82
Strain of Virus: EBV
GenBank Acc: X81780
Transfection Reagent: Oligofectamine

Offtargets for "aacucccaauauccaucugcu" siRNA in Human Genome sequences
See X81780 at Genbank
Pubmed:18230756
Article:EBV LMP2A affects LMP1-mediated NF-kappaB signaling and survival of lymphoma cells by regulating TRAF2 expression.
Authors:Guasparri I, Bubman D, Cesarman E.
Journal:Blood. 2008 Apr 1;111(7):3813-20. Epub 2008 Jan 29. Erratum in: Blood. 2008 Jul 15;112(2):452.
Entrez:18230756

siRNA sequence "aagcacuuuagugaccuggaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aagcacuuuagugaccuggaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1846 " record
Length: 21
GC Content:43 %
Starting position: 136954
Strain of Virus: B95-8
GenBank Acc: NC_009334
Transfection Reagent: Jetsi-ENDO
Incubation Time (Hours):72

Offtargets for "aagcacuuuagugaccuggaa" siRNA in Human Genome sequences
See NC_009334 at Genbank
Pubmed:19704168
Article:Inhibition of Epstein-Barr virus replication by small interfering RNA targeting the Epstein-Barr virus protease gene.
Authors:Larrat S, Morand P, Bas A, Vigne S, Crance JM, Boyer V, Nicod S, Grossi L, Buisson M, Burmeister WP, Seigneurin JM, Germi R.
Journal:Antivir Ther. 2009;14(5):655-62.
Entrez:19704168

siRNA sequence "cugcaaagggacccacgguggaacagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cugcaaagggacccacgguggaacagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1867 " record
Length: 27
GC Content:63 %
Starting position: 108192
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cugcaaagggacccacgguggaacagg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "cgauuaaggaccuuguuaugacaaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "cgauuaaggaccuuguuaugacaaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1877 " record
Length: 25
GC Content:36 %
Starting position: 109682
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "cgauuaaggaccuuguuaugacaaa" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "aaggccaucgaugcuggauuu" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aaggccaucgaugcuggauuu" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1848 " record
Length: 21
GC Content:48 %
Starting position: 137074
Strain of Virus: B95-8
GenBank Acc: NC_009334
Transfection Reagent: Jetsi-ENDO
Incubation Time (Hours):72

Offtargets for "aaggccaucgaugcuggauuu" siRNA in Human Genome sequences
See NC_009334 at Genbank
Pubmed:19704168
Article:Inhibition of Epstein-Barr virus replication by small interfering RNA targeting the Epstein-Barr virus protease gene.
Authors:Larrat S, Morand P, Bas A, Vigne S, Crance JM, Boyer V, Nicod S, Grossi L, Buisson M, Burmeister WP, Seigneurin JM, Germi R.
Journal:Antivir Ther. 2009;14(5):655-62.
Entrez:19704168

siRNA sequence "aggcaagcuguccuucuuuga" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "aggcaagcuguccuucuuuga" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1845 " record
Length: 21
GC Content:48 %
Starting position: 136857
Strain of Virus: B95-8
GenBank Acc: NC_009334
Transfection Reagent: Jetsi-ENDO
Incubation Time (Hours):72

Offtargets for "aggcaagcuguccuucuuuga" siRNA in Human Genome sequences
See NC_009334 at Genbank
Pubmed:19704168
Article:Inhibition of Epstein-Barr virus replication by small interfering RNA targeting the Epstein-Barr virus protease gene.
Authors:Larrat S, Morand P, Bas A, Vigne S, Crance JM, Boyer V, Nicod S, Grossi L, Buisson M, Burmeister WP, Seigneurin JM, Germi R.
Journal:Antivir Ther. 2009;14(5):655-62.
Entrez:19704168

siRNA sequence "ccgggagcgauagagcagggccccg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "ccgggagcgauagagcagggccccg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1869 " record
Length: 25
GC Content:76 %
Starting position: 109240
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "ccgggagcgauagagcagggccccg" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcccgcuccuaccugcaauaucaagg" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcccgcuccuaccugcaauaucaagg" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1878 " record
Length: 26
GC Content:58 %
Starting position: 97337
Strain of Virus: gD1
GenBank Acc: AY961628
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcccgcuccuaccugcaauaucaagg" siRNA in Human Genome sequences
See AY961628 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "guaagaccucccuuuacaaccuaag" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "guaagaccucccuuuacaaccuaag" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1874 " record
Length: 25
GC Content:44 %
Starting position: 109487
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "guaagaccucccuuuacaaccuaag" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gcaucguggucaaggagguuccaac" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gcaucguggucaaggagguuccaac" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1872 " record
Length: 25
GC Content:56 %
Starting position: 109350
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gcaucguggucaaggagguuccaac" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888

siRNA sequence "gugauaaccauggacgaggacggggaa" alignment with "Epstein-Barr Virus [EBV]" virus reference Genome sequences
siRNA sequence matching with "gugauaaccauggacgaggacggggaa" Epstein-Barr Virus [EBV]" Virus reference Genome sequences
Browse all the records for "Epstein-Barr Virus [EBV]" virus
Browse "virsi1864 " record
Length: 27
GC Content:56 %
Starting position: 108056
Strain of Virus: B95-8
GenBank Acc: V01555
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72

Offtargets for "gugauaaccauggacgaggacggggaa" siRNA in Human Genome sequences
See V01555 at Genbank
Pubmed:19471888
Article:Maintenance of the viral episome is essential for the cell survival of an Epstein-Barr virus positive gastric carcinoma cell line.
Authors:Oh ST, Kim M, Lee SK.
Journal:Arch Pharm Res. 2009 May;32(5):729-36. Epub 2009 May 27.
Entrez:19471888


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1853	acguccaaguugcauuggc	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1854	ggagguuccaacccgaaau	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1855	ggacuaccgacgaaggaac	Epstein-Barr Virus [EBV]	EBNA1	HeLa	Protein	High	16343579	Blast SL	refseqs
virsi1857	aacugguggacucuauugg	Epstein-Barr Virus [EBV]	LMP1	C666	mRNA	High	15013447	Blast SL	refseqs
virsi1859	caacagcuagcagacauug	Epstein-Barr Virus [EBV]	Zta	NPC	Protein	High	15166418	Blast SL	refseqs
virsi1856	ggaauuugcacggacaggc	Epstein-Barr Virus [EBV]	LMP1	B95.8	Protein	High	16458115	Blast SL	refseqs
virsi1885	gccuguccgugcaaauucc	Epstein-Barr Virus [EBV]	LMP1	C666-1	Protein	High	20338061	Blast SL	refseqs
virsi1860	ccucuccucuuccauaggc	Epstein-Barr Virus [EBV]	LMP1	C666-1	RNA	High	16865275	Blast SL	refseqs
virsi1850	guggacagagaaggucucu	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	High	15041532	Blast SL	refseqs
virsi1873	guaagaccucccuuuacaaccuaag	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	94	19471888	Blast SL	refseqs
virsi1871	gcaucguggucaaggagguuccaac	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	90	19471888	Blast SL	refseqs
virsi1849	ccaauagaguccaccaguu	Epstein-Barr Virus [EBV]	LMP1	C666-1	mRNA	76	15041532	Blast SL	refseqs
virsi1858	ggaauuugcacggacaggc	Epstein-Barr Virus [EBV]	LMP1	C666-1	Protein	75	17507800	Blast SL	refseqs
virsi1883	aagagaccuucucuguccacu	Epstein-Barr Virus [EBV]	LMP1	IBL-1	Protein	75	18230756	Blast SL	refseqs
virsi1884	aacucccaauauccaucugcu	Epstein-Barr Virus [EBV]	LMP2A	IBL-1	Protein	75	18230756	Blast SL	refseqs
virsi1846	aagcacuuuagugaccuggaa	Epstein-Barr Virus [EBV]	PR	293/EBV-GFP	mRNA	64	19704168	Blast SL	refseqs
virsi1867	cugcaaagggacccacgguggaacagg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	62	19471888	Blast SL	refseqs
virsi1877	cgauuaaggaccuuguuaugacaaa	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	61	19471888	Blast SL	refseqs
virsi1848	aaggccaucgaugcuggauuu	Epstein-Barr Virus [EBV]	PR	293/EBV-GFP	mRNA	54	19704168	Blast SL	refseqs
virsi1845	aggcaagcuguccuucuuuga	Epstein-Barr Virus [EBV]	PR	293/EBV-GFP	mRNA	48	19704168	Blast SL	refseqs
virsi1869	ccgggagcgauagagcagggccccg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	48	19471888	Blast SL	refseqs
virsi1878	gcccgcuccuaccugcaauaucaagg	Epstein-Barr Virus [EBV]	EBNA1	HeLa	mRNA	43	19471888	Blast SL	refseqs
virsi1874	guaagaccucccuuuacaaccuaag	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	41	19471888	Blast SL	refseqs
virsi1872	gcaucguggucaaggagguuccaac	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	29	19471888	Blast SL	refseqs
virsi1864	gugauaaccauggacgaggacggggaa	Epstein-Barr Virus [EBV]	EBNA1	SNU-719	mRNA	28	19471888	Blast SL	refseqs



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: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm