Browse BY
- Family of Virus
- Virus Name
- Gene Name
- Pubmed Id
- VsiRNAid
Total number of Results for C are 53
Results from 0 - 25
siRNA sequence "gcaugggcgguaauagcaa" alignment with "Influenza A Virus" virus reference Genome sequences
siRNA sequence matching with "gcaugggcgguaauagcaa" Influenza A Virus" Virus reference Genome sequences
Browse all the records for "Influenza A Virus" virus
Browse "virsi1511 " record
Length: 19
GC Content:53 %
Starting position: 1130
Strain of Virus: CSF
GenBank Acc: X87939
Transfection Reagent: X-TremeGene
Incubation Time (Hours):72
Length: 19
GC Content:53 %
Starting position: 1130
Strain of Virus: CSF
GenBank Acc: X87939
Transfection Reagent: X-TremeGene
Incubation Time (Hours):72
Offtargets for "gcaugggcgguaauagcaa" siRNA in Human Genome sequences
See X87939 at Genbank
Pubmed:19850420
Article:RNA interference targeting nucleocapsid protein (C) inhibits classical swine fever virus replication in SK-6 cells.
Authors:Porntrakulpipat S, Supankong S, Chatchawanchonteera A, Pakdee P.
Journal:Vet Microbiol. 2010 Apr 21;142(1-2):41-4. Epub 2009 Sep 30.
Entrez:19850420
Article:RNA interference targeting nucleocapsid protein (C) inhibits classical swine fever virus replication in SK-6 cells.
Authors:Porntrakulpipat S, Supankong S, Chatchawanchonteera A, Pakdee P.
Journal:Vet Microbiol. 2010 Apr 21;142(1-2):41-4. Epub 2009 Sep 30.
Entrez:19850420
siRNA sequence "gaacaaacaaacagcgaugaa" alignment with "West Nile Virus [WNV]" virus reference Genome sequences
siRNA sequence matching with "gaacaaacaaacagcgaugaa" West Nile Virus [WNV]" Virus reference Genome sequences
Browse all the records for "West Nile Virus [WNV]" virus
Browse "virsi1097 " record
Length: 21
GC Content:38 %
Starting position: 312
Strain of Virus: Linage
GenBank Acc: DQ211652
Transfection Reagent: Lipid-Based Reagent/Electroporation
Incubation Time (Hours):48
Length: 21
GC Content:38 %
Starting position: 312
Strain of Virus: Linage
GenBank Acc: DQ211652
Transfection Reagent: Lipid-Based Reagent/Electroporation
Incubation Time (Hours):48
Offtargets for "gaacaaacaaacagcgaugaa" siRNA in Human Genome sequences
See DQ211652 at Genbank
Pubmed:15985182
Article:Actively replicating West Nile virus is resistant to cytoplasmic delivery of siRNA.
Authors:Geiss BJ, Pierson TC, Diamond MS.
Journal:Virol J. 2005 Jun 28;2:53.
Entrez:15985182
Article:Actively replicating West Nile virus is resistant to cytoplasmic delivery of siRNA.
Authors:Geiss BJ, Pierson TC, Diamond MS.
Journal:Virol J. 2005 Jun 28;2:53.
Entrez:15985182
siRNA sequence "aagaacaauuauaguaaauca" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "aagaacaauuauaguaaauca" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1669 " record
Length: 21
GC Content:19 %
Starting position: 2263
GenBank Acc: M19183
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 21
GC Content:19 %
Starting position: 2263
GenBank Acc: M19183
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "aagaacaauuauaguaaauca" siRNA in Human Genome sequences
See M19183 at Genbank
Pubmed:19064272
Article:Inhibition of woodchuck hepatitis virus gene expression in primary hepatocytes by siRNA enhances the cellular gene expression.
Authors:Meng Z, Qiu S, Zhang X, Wu J, Schreiter T, Xu Y, Yang D, Roggendorf M, Schlaak J, Lu M.
Journal:Virology. 2009 Feb 5;384(1):88-96. Epub 2008 Dec 6.
Entrez:19064272
Article:Inhibition of woodchuck hepatitis virus gene expression in primary hepatocytes by siRNA enhances the cellular gene expression.
Authors:Meng Z, Qiu S, Zhang X, Wu J, Schreiter T, Xu Y, Yang D, Roggendorf M, Schlaak J, Lu M.
Journal:Virology. 2009 Feb 5;384(1):88-96. Epub 2008 Dec 6.
Entrez:19064272
siRNA sequence "cauuguucaccucaccaua" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "cauuguucaccucaccaua" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1139 " record
Length: 19
GC Content:42 %
Starting position: 2137
GenBank Acc: AB050018
Transfection Reagent: Oligofectamine
Length: 19
GC Content:42 %
Starting position: 2137
GenBank Acc: AB050018
Transfection Reagent: Oligofectamine
Offtargets for "cauuguucaccucaccaua" siRNA in Human Genome sequences
See AB050018 at Genbank
Pubmed:12753904
Article:Short interfering RNA-directed inhibition of hepatitis B virus replication.
Authors:Hamasaki K, Nakao K, Matsumoto K, Ichikawa T, Ishikawa H, Eguchi K.
Journal:FEBS Lett. 2003 May 22;543(1-3):51-4.
Entrez:12753904
Article:Short interfering RNA-directed inhibition of hepatitis B virus replication.
Authors:Hamasaki K, Nakao K, Matsumoto K, Ichikawa T, Ishikawa H, Eguchi K.
Journal:FEBS Lett. 2003 May 22;543(1-3):51-4.
Entrez:12753904
siRNA sequence "cauuguucaccucaccaua" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "cauuguucaccucaccaua" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1994 " record
Length: 19
GC Content:42 %
Starting position: 2137
GenBank Acc: AB050018
Transfection Reagent: Oligofectamine
Length: 19
GC Content:42 %
Starting position: 2137
GenBank Acc: AB050018
Transfection Reagent: Oligofectamine
Offtargets for "cauuguucaccucaccaua" siRNA in Human Genome sequences
See AB050018 at Genbank
Pubmed:12753904
Article:Short interfering RNA-directed inhibition of hepatitis B virus replication.
Authors:Hamasaki K, Nakao K, Matsumoto K, Ichikawa T, Ishikawa H, Eguchi K.
Journal:FEBS Lett. 2003 May 22;543(1-3):51-4.
Entrez:12753904
Article:Short interfering RNA-directed inhibition of hepatitis B virus replication.
Authors:Hamasaki K, Nakao K, Matsumoto K, Ichikawa T, Ishikawa H, Eguchi K.
Journal:FEBS Lett. 2003 May 22;543(1-3):51-4.
Entrez:12753904
siRNA sequence "ugcugaaacgcgagagaaa" alignment with "Dengue Virus [DENV]" virus reference Genome sequences
siRNA sequence matching with "ugcugaaacgcgagagaaa" Dengue Virus [DENV]" Virus reference Genome sequences
Browse all the records for "Dengue Virus [DENV]" virus
Browse "virsi2333 " record
Length: 19
GC Content:47 %
Starting position: 140
Strain of Virus: DENV-1-4
GenBank Acc: AY947539
Transfection Reagent: RNAiMAX
Incubation Time (Hours):48
Length: 19
GC Content:47 %
Starting position: 140
Strain of Virus: DENV-1-4
GenBank Acc: AY947539
Transfection Reagent: RNAiMAX
Incubation Time (Hours):48
Offtargets for "ugcugaaacgcgagagaaa" siRNA in Human Genome sequences
See AY947539 at Genbank
Pubmed:21795337
Article:Inhibition of dengue virus infections in cell cultures and in AG129 mice by an siRNA targeting a highly conserved sequence. Stein DA, Perry ST, Buck MD, Oehmen CS, Fischer MA, Poore E, Smith JL, Lancaster AM, Hirsch AJ, Slifka MK, Nelson JA, Shresta S, Fraceh K. J Virol. 2011 Jul 27. [Epub ahead of print] J Virol. 2011 21795337
Authors:
Journal:
Entrez:
Article:Inhibition of dengue virus infections in cell cultures and in AG129 mice by an siRNA targeting a highly conserved sequence. Stein DA, Perry ST, Buck MD, Oehmen CS, Fischer MA, Poore E, Smith JL, Lancaster AM, Hirsch AJ, Slifka MK, Nelson JA, Shresta S, Fraceh K. J Virol. 2011 Jul 27. [Epub ahead of print] J Virol. 2011 21795337
Authors:
Journal:
Entrez:
siRNA sequence "uccuacuguucaagccuccaa" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "uccuacuguucaagccuccaa" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1951 " record
Length: 21
GC Content:48 %
Starting position: 42
GenBank Acc: HQ641710
Transfection Reagent: Magnetic Nanoparticles
Incubation Time (Hours):48
Length: 21
GC Content:48 %
Starting position: 42
GenBank Acc: HQ641710
Transfection Reagent: Magnetic Nanoparticles
Incubation Time (Hours):48
Offtargets for "uccuacuguucaagccuccaa" siRNA in Human Genome sequences
See HQ641710 at Genbank
Pubmed:20622325
Article:Inhibition of HBV-DNA replication and expression by siRNA based on magnetic nanoparticles transfering in HepG2 2.2.15 cells.
Authors:He Y, Jiang Y, Wang G, Luo H, Xiao X, Deng C, Luo K, Su X.
Journal:Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2010 Jun;35(6):543-8.
Entrez:20622325
Article:Inhibition of HBV-DNA replication and expression by siRNA based on magnetic nanoparticles transfering in HepG2 2.2.15 cells.
Authors:He Y, Jiang Y, Wang G, Luo H, Xiao X, Deng C, Luo K, Su X.
Journal:Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2010 Jun;35(6):543-8.
Entrez:20622325
siRNA sequence "ggaccaaaagaaacaccaucc" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "ggaccaaaagaaacaccaucc" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2216 " record
Length: 21
GC Content:48 %
Strain of Virus: 3a
GenBank Acc: EU266536.
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:48 %
Strain of Virus: 3a
GenBank Acc: EU266536.
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "ggaccaaaagaaacaccaucc" siRNA in Human Genome sequences
See EU266536. at Genbank
Pubmed:17112601
Article:Inhibition of SARS-CoV replication cycle by small interference RNAs silencing specific SARS proteins, 7a/7b, 3a/3b and S.
Authors:Akerström S, Mirazimi A, Tan YJ.
Journal:Antiviral Res. 2007 Mar;73(3):219-27. Epub 2006 Nov 7.
Entrez:17112601
Article:Inhibition of SARS-CoV replication cycle by small interference RNAs silencing specific SARS proteins, 7a/7b, 3a/3b and S.
Authors:Akerström S, Mirazimi A, Tan YJ.
Journal:Antiviral Res. 2007 Mar;73(3):219-27. Epub 2006 Nov 7.
Entrez:17112601
siRNA sequence "cccccccucccgggagagcc" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "cccccccucccgggagagcc" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2177 " record
Length: 20
GC Content:85 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 20
GC Content:85 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "cccccccucccgggagagcc" siRNA in Human Genome sequences
See NC_004102 at Genbank
Pubmed:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
siRNA sequence "agaccgugcaccaugagcac" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "agaccgugcaccaugagcac" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2179 " record
Length: 20
GC Content:60 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 20
GC Content:60 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "agaccgugcaccaugagcac" siRNA in Human Genome sequences
See NC_004102 at Genbank
Pubmed:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
siRNA sequence "ccaugagcacgaauccuaaa" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "ccaugagcacgaauccuaaa" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2180 " record
Length: 20
GC Content:45 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 20
GC Content:45 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "ccaugagcacgaauccuaaa" siRNA in Human Genome sequences
See NC_004102 at Genbank
Pubmed:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
siRNA sequence "cucaguuuacuagugccauuuguuc" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "cucaguuuacuagugccauuuguuc" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Offtargets for "cucaguuuacuagugccauuuguuc" siRNA in Human Genome sequences
Pubmed:19804649
Article:Hepatitis B virus inhibition in mice by lentiviral vector mediated short hairpin RNA.
Authors:Deng L, Li G, Xi L, Yin A, Gao Y, You W, Wang X, Sun B.
Journal:BMC Gastroenterol. 2009 Oct 6;9:73.
Entrez:19804649
Article:Hepatitis B virus inhibition in mice by lentiviral vector mediated short hairpin RNA.
Authors:Deng L, Li G, Xi L, Yin A, Gao Y, You W, Wang X, Sun B.
Journal:BMC Gastroenterol. 2009 Oct 6;9:73.
Entrez:19804649
siRNA sequence "gaucaggcaacuauugugg" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "gaucaggcaacuauugugg" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1158 " record
Length: 19
GC Content:47 %
Starting position: 2191
Strain of Virus: adw
GenBank Acc: HPBadwZCG
Incubation Time (Hours):72
Length: 19
GC Content:47 %
Starting position: 2191
Strain of Virus: adw
GenBank Acc: HPBadwZCG
Incubation Time (Hours):72
Offtargets for "gaucaggcaacuauugugg" siRNA in Human Genome sequences
See HPBadwZCG at Genbank
Pubmed:12668968
Article:Inhibition of hepatitis B virus expression and replication by RNA interference.
Authors:Shlomai A, Shaul Y.
Journal:Hepatology. 2003 Apr;37(4):764-70.
Entrez:12668968
Article:Inhibition of hepatitis B virus expression and replication by RNA interference.
Authors:Shlomai A, Shaul Y.
Journal:Hepatology. 2003 Apr;37(4):764-70.
Entrez:12668968
siRNA sequence "aagaccuagucaguuaug" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "aagaccuagucaguuaug" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1161 " record
Length: 18
GC Content:39 %
Starting position: 2149
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 18
GC Content:39 %
Starting position: 2149
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "aagaccuagucaguuaug" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:12951075
Article:Selective inhibition of hepatitis B virus replication by RNA interference.
Authors:Ying C, De Clercq E, Neyts J.
Journal:Biochem Biophys Res Commun. 2003 Sep 19;309(2):482-4. Erratum in: Biochem Biophys Res Commun. 2005 Nov 4;336(4):1300.
Entrez:12951075
Article:Selective inhibition of hepatitis B virus replication by RNA interference.
Authors:Ying C, De Clercq E, Neyts J.
Journal:Biochem Biophys Res Commun. 2003 Sep 19;309(2):482-4. Erratum in: Biochem Biophys Res Commun. 2005 Nov 4;336(4):1300.
Entrez:12951075
siRNA sequence "caauaugcuaaaacgcggu" alignment with "St. Louis Encephalitis [SLE]" virus reference Genome sequences
siRNA sequence matching with "caauaugcuaaaacgcggu" St. Louis Encephalitis [SLE]" Virus reference Genome sequences
Browse all the records for "St. Louis Encephalitis [SLE]" virus
Browse "virsi1226 " record
Length: 19
GC Content:42 %
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:42 %
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "caauaugcuaaaacgcggu" siRNA in Human Genome sequences
Pubmed:21423625
Article:Silencing early viral replication in macrophages and dendritic cells effectively suppresses flavivirus encephalitis.
Authors:Ye C, Abraham S, Wu H, Shankar P, Manjunath N.
Journal:PLoS One. 2011 Mar 15;6(3):e17889.
Entrez:21423625
Article:Silencing early viral replication in macrophages and dendritic cells effectively suppresses flavivirus encephalitis.
Authors:Ye C, Abraham S, Wu H, Shankar P, Manjunath N.
Journal:PLoS One. 2011 Mar 15;6(3):e17889.
Entrez:21423625
siRNA sequence "aagaccuagucaguuaug" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "aagaccuagucaguuaug" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi2010 " record
Length: 18
GC Content:39 %
Starting position: 2149
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 18
GC Content:39 %
Starting position: 2149
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "aagaccuagucaguuaug" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:12951075
Article:Selective inhibition of hepatitis B virus replication by RNA interference.
Authors:Ying C, De Clercq E, Neyts J.
Journal:Biochem Biophys Res Commun. 2003 Sep 19;309(2):482-4. Erratum in: Biochem Biophys Res Commun. 2005 Nov 4;336(4):1300.
Entrez:12951075
Article:Selective inhibition of hepatitis B virus replication by RNA interference.
Authors:Ying C, De Clercq E, Neyts J.
Journal:Biochem Biophys Res Commun. 2003 Sep 19;309(2):482-4. Erratum in: Biochem Biophys Res Commun. 2005 Nov 4;336(4):1300.
Entrez:12951075
siRNA sequence "uagagucuccggaacauug" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "uagagucuccggaacauug" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1042 " record
Length: 19
GC Content:47 %
Starting position: 2027
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:47 %
Starting position: 2027
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "uagagucuccggaacauug" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:17596868
Article:Targeted inhibition of HBV gene expression by single-chain antibody mediated small interfering RNA delivery.
Authors:Wen WH, Liu JY, Qin WJ, Zhao J, Wang T, Jia LT, Meng YL, Gao H, Xue CF, Jin BQ, Yao LB, Chen SY, Yang AG.
Journal:Hepatology. 2007 Jul;46(1):84-94.
Entrez:17596868
Article:Targeted inhibition of HBV gene expression by single-chain antibody mediated small interfering RNA delivery.
Authors:Wen WH, Liu JY, Qin WJ, Zhao J, Wang T, Jia LT, Meng YL, Gao H, Xue CF, Jin BQ, Yao LB, Chen SY, Yang AG.
Journal:Hepatology. 2007 Jul;46(1):84-94.
Entrez:17596868
siRNA sequence "gugcgauccagauuuguuuug" alignment with "Polio Virus" virus reference Genome sequences
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Browse all the records for "Polio Virus" virus
Browse "virsi3002 " record
Length: 21
GC Content:43 %
Starting position: 2417
GenBank Acc: FJ769385
Transfection Reagent: Lipofectamine 2000
Length: 21
GC Content:43 %
Starting position: 2417
GenBank Acc: FJ769385
Transfection Reagent: Lipofectamine 2000
Offtargets for "gugcgauccagauuuguuuug" siRNA in Human Genome sequences
See FJ769385 at Genbank
Pubmed:15613331
Article:Poliovirus escape from RNA interference: short interfering RNA-target recognition and implications for therapeutic approaches.
Authors:Gitlin L, Stone JK, Andino R.
Journal:J Virol. 2005 Jan;79(2):1027-35.
Entrez:15613331
Article:Poliovirus escape from RNA interference: short interfering RNA-target recognition and implications for therapeutic approaches.
Authors:Gitlin L, Stone JK, Andino R.
Journal:J Virol. 2005 Jan;79(2):1027-35.
Entrez:15613331
siRNA sequence "aguguugggucgcgaaaggc" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "aguguugggucgcgaaaggc" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2178 " record
Length: 20
GC Content:60 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 20
GC Content:60 %
GenBank Acc: NC_004102
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "aguguugggucgcgaaaggc" siRNA in Human Genome sequences
See NC_004102 at Genbank
Pubmed:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
Article:Inhibition of hepatitis C virus RNA replication by short hairpin RNA synthesized by T7 RNA polymerase in hepatitis C virus subgenomic replicons.
Authors:Hamazaki H, Ujino S, Miyano-Kurosaki N, Shimotohno K, Takaku H.
Journal:Biochem Biophys Res Commun. 2006 May 12;343(3):988-94. Epub 2006 Mar 29.
Entrez:16566896
siRNA sequence "accaaacguaacaccaacc" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "accaaacguaacaccaacc" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1405 " record
Length: 21
GC Content:43 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:43 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "accaaacguaacaccaacc" siRNA in Human Genome sequences
See AY587299 at Genbank
Pubmed:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
siRNA sequence "uuuggaagagaaaccguua" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "uuuggaagagaaaccguua" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1443 " record
Length: 19
GC Content:37 %
Starting position: 2229
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Oligofectamine
Incubation Time (Hours):168
Length: 19
GC Content:37 %
Starting position: 2229
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Oligofectamine
Incubation Time (Hours):168
Offtargets for "uuuggaagagaaaccguua" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:17245534
Article:Inhibition of hepatitis B virus replication by shRNAs in stably HBV expressed HEPG2 2.2.15 cell lines.
Authors:Kayhan H, Karatayli E, Turkyilmaz AR, Sahin F, Yurdaydin C, Bozdayi AM.
Journal:Arch Virol. 2007;152(5):871-9. Epub 2007 Jan 25.
Entrez:17245534
Article:Inhibition of hepatitis B virus replication by shRNAs in stably HBV expressed HEPG2 2.2.15 cell lines.
Authors:Kayhan H, Karatayli E, Turkyilmaz AR, Sahin F, Yurdaydin C, Bozdayi AM.
Journal:Arch Virol. 2007;152(5):871-9. Epub 2007 Jan 25.
Entrez:17245534
siRNA sequence "gucaauaugcuaaaacgcg" alignment with "St. Louis Encephalitis [SLE]" virus reference Genome sequences
siRNA sequence matching with "gucaauaugcuaaaacgcg" St. Louis Encephalitis [SLE]" Virus reference Genome sequences
Browse all the records for "St. Louis Encephalitis [SLE]" virus
Browse "virsi1224 " record
Length: 19
GC Content:42 %
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:42 %
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "gucaauaugcuaaaacgcg" siRNA in Human Genome sequences
Pubmed:21423625
Article:Silencing early viral replication in macrophages and dendritic cells effectively suppresses flavivirus encephalitis.
Authors:Ye C, Abraham S, Wu H, Shankar P, Manjunath N.
Journal:PLoS One. 2011 Mar 15;6(3):e17889.
Entrez:21423625
Article:Silencing early viral replication in macrophages and dendritic cells effectively suppresses flavivirus encephalitis.
Authors:Ye C, Abraham S, Wu H, Shankar P, Manjunath N.
Journal:PLoS One. 2011 Mar 15;6(3):e17889.
Entrez:21423625
siRNA sequence "aaguucaggcaacucuugugg" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "aaguucaggcaacucuugugg" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi1141 " record
Length: 21
GC Content:48 %
Starting position: 2188
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine
Incubation Time (Hours):48
Length: 21
GC Content:48 %
Starting position: 2188
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: Lipofectamine
Incubation Time (Hours):48
Offtargets for "aaguucaggcaacucuugugg" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:17334648
Article:Effective inhibition of hepatitis B virus replication by small interfering RNAs expressed from human foamy virus vectors.
Authors:Sun Y, Li Z, Li L, Li J, Liu X, Li W.
Journal:Int J Mol Med. 2007 Apr;19(4):705-11.
Entrez:17334648
Article:Effective inhibition of hepatitis B virus replication by small interfering RNAs expressed from human foamy virus vectors.
Authors:Sun Y, Li Z, Li L, Li J, Liu X, Li W.
Journal:Int J Mol Med. 2007 Apr;19(4):705-11.
Entrez:17334648
siRNA sequence "gacgggauaaauuucgcaa" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "gacgggauaaauuucgcaa" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1980 " record
Length: 19
GC Content:42 %
Starting position: 817
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:42 %
Starting position: 817
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gacgggauaaauuucgcaa" siRNA in Human Genome sequences
See D17763 at Genbank
Pubmed:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
siRNA sequence "gguuuggguaaagucaucgau" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "gguuuggguaaagucaucgau" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2217 " record
Length: 21
GC Content:43 %
Strain of Virus: 3a
GenBank Acc: EU266536
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:43 %
Strain of Virus: 3a
GenBank Acc: EU266536
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gguuuggguaaagucaucgau" siRNA in Human Genome sequences
See EU266536 at Genbank
Pubmed:17112601
Article:Inhibition of SARS-CoV replication cycle by small interference RNAs silencing specific SARS proteins, 7a/7b, 3a/3b and S.
Authors:Akerström S, Mirazimi A, Tan YJ.
Journal:Antiviral Res. 2007 Mar;73(3):219-27. Epub 2006 Nov 7.
Entrez:17112601
Article:Inhibition of SARS-CoV replication cycle by small interference RNAs silencing specific SARS proteins, 7a/7b, 3a/3b and S.
Authors:Akerström S, Mirazimi A, Tan YJ.
Journal:Antiviral Res. 2007 Mar;73(3):219-27. Epub 2006 Nov 7.
Entrez:17112601
Virus_Name
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific SL: siRNA seedlocator algorithm