VIRmiRNA | Resource for experimental viral miRNA and their targets

VIRmiRNA -A database of viral miRNA
Total number of Results for KSHV are 30

VMR_ID	miRNA	Virus	miRNA_Seq	Length	GC	Seed analysis miRBase	Seed analysis VIRmiRNA	Experimental Method	Target (if any)	PMID
VMR_ID	miRNA	Virus	miRNA_Seq	Length	GC	Seed analysis miRBase	Seed analysis VIRmiRNA	Experimental Method	Target (if any)	PMID
VMR_0390	kshv-miR-k10a_+1_5	KSHV	uuaguguuguccccccgagugg(c)	23	61			Deep sequencing	Expt. Pred.	22100165
VMR_0391	kshv-miR-k10b_+1_5	KSHV	uugguguuguccccccgagugg(c)	23	65			Deep sequencing	Expt. Pred.	22100165
VMR_0393	kshv-miR-k12-1*	KSHV	gcagcaccuguuuccugcaacc	22	59			Solexa(NGS)	Expt. Pred.	15800047, 19889781, 20566670
VMR_0394	kshv-miR-k12-10a	KSHV	uaguguuguccccccgaguggc	22	64			Solexa(NGS)	Expt. Pred.	15800047, 15782219, 15994824, 19889781, 20566670
VMR_0396	kshv-miR-k12-10b	KSHV	ugguguuguccccccgaguggc	22	68			Solexa(NGS)	Expt. Pred.	15800047, 19889781, 20566670
VMR_0397	kshv-miR-k12-11	KSHV	uuaaugcuuagccuguguccga	22	45			Cloned	Expt. Pred.	15782219, 19889781, 20566670, 22100165, 17881434, 18075594
VMR_0399	kshv-miR-k12-12	KSHV	ugggggagggugcccugguuga	22	68			Cloned	Expt. Pred.	16540699, 19889781, 20566670
VMR_0402	kshv-miR-k12-2*	KSHV	gaucuuccagggcuagagcug	21	57			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0404	kshv-miR-k12-3*	KSHV	ucgcggucacagaaugugaca	21	52			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0405	kshv-miR-k12-3-3p	KSHV	ucgcggucacagaaugugaca	21	52			Northern blot analysis, RT-PCR	Expt. Pred.	17500590
VMR_0406	kshv-miR-k12-4-3p	KSHV	uagaauacugaggccuagcuga	22	45			Cloned	Expt. Pred.	15800047, 19889781, 20566670, 22100165
VMR_0408	kshv-miR-k12-5	KSHV	uaggaugccuggaacuugccggu	23	57			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0410	kshv-miR-k12-6-3p	KSHV	ugaugguuuucgggcuguugag	22	50			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0412	kshv-miR-k12-7	KSHV	ugaucccauguugcuggcgc	20	60			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0415	kshv-miR-k12-8	KSHV	cuaggcgcgacugagagagca	21	62			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0417	kshv-miR-k12-9	KSHV	cuggguauacgcagcugcguaa	22	55			Cloned	Expt. Pred.	15800047, 20566670
VMR_0392	kshv-miR-k12-1	KSHV	auuacaggaaacuggguguaagc	23	43			Solexa(NGS)	Expt. Pred.	15800047, 19889781, 20566670, 22100165
VMR_0395	kshv-miR-k12-10a*	KSHV	ggcuuggggcgauaccaccacu	22	64			Solexa(NGS)	Expt. Pred.	15800047, 19889781, 20566670
VMR_0398	kshv-miR-k12-11*	KSHV	ggucacagcuuaaacauuucuagg	24	42			Cloned	Expt. Pred.	15782219, 19889781, 20566670
VMR_0400	kshv-miR-k12-12*	KSHV	aaccaggccaccauuccucuccg	23	61			Cloned	Expt. Pred.	16540699, 19889781, 20566670
VMR_0401	kshv-miR-k12-2	KSHV	aacuguaguccgggucgaucug	22	55			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0403	kshv-miR-k12-3	KSHV	ucacauucugaggacggcagcga	23	57			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0407	kshv-miR-k12-4-5p	KSHV	agcuaaaccgcaguacucuagg	22	50			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0409	kshv-miR-k12-5*	KSHV	agguagucccuggugcccuaagg	23	61			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0411	kshv-miR-k12-6-5p	KSHV	ccagcagcaccuaauccaucgg	22	59			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0413	kshv-miR-k12-7*	KSHV	agcgccaccggacggggauuuaug	24	63			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0414	kshv-miR-k12-7-5p	KSHV	agcgccaccggacggggauuuaug	24	63			RT-PCR	Expt. Pred.	21283761
VMR_0416	kshv-miR-k12-8*	KSHV	acucccucacuaacgccccgcu	22	64			Cloned	Expt. Pred.	15800047, 19889781, 20566670
VMR_0418	kshv-miR-k12-9*	KSHV	acccagcugcguaaaccccgcu	22	64			Cloned	Expt. Pred.	15800047, 20566670
VMR_0419	kshv-miR-k3_+1_5	KSHV	aucacauucugaggacggcagcga	24	54			Deep sequencing	Expt. Pred.	22100165