VIRmiRNA | Resource for experimental viral miRNA and their targets

VIRmiRNA -A database of viral miRNA
Total number of Results for HSV1 are 48

VMR_ID	miRNA	Virus	miRNA_Seq	Length	GC	Seed analysis miRBase	Seed analysis VIRmiRNA	Experimental Method	Target (if any)	PMID
VMR_ID	miRNA	Virus	miRNA_Seq	Length	GC	Seed analysis miRBase	Seed analysis VIRmiRNA	Experimental Method	Target (if any)	PMID
VMR_0289	hsv1-miR-92944	HSV1	uggcucggugagcgacgguc	20	70			Northern blot analysis	Expt. Pred.	22661375
VMR_0291	hsv1-miR-h1*	HSV1	uacaccccccugccuuccacccu	23	65			Northern blot analysis, Solexa(NGS)	Expt. Pred.	16699030, 20181707
VMR_0292	hsv1-miR-h11	HSV1	uuaggacaaagugcgaacgc	20	50			Solexa(NGS)	Expt. Pred.	20181707
VMR_0293	hsv1-miR-h12	HSV1	uugggacgaagugcgaacgcuu	22	55			Solexa(NGS)	Expt. Pred.	20181707
VMR_0294	hsv1-miR-h13	HSV1	uuagggcgaagugcgagcacugg	23	61			Solexa(NGS)	Expt. Pred.	20181707
VMR_0295	hsv1-miR-h14-3p	HSV1	ucugugccgggcgcgugcgac	21	76			Solexa(NGS)	Expt. Pred.	20181707
VMR_0297	hsv1-miR-h15	HSV1	ggccccgggccgggccgccacg	22	95			Solexa(NGS)	Expt. Pred.	20181707
VMR_0299	hsv1-miR-h17	HSV1	uggcgcuggggcgcgaggcgg	21	86			Solexa(NGS)	Expt. Pred.	20181707
VMR_0301	hsv1-miR-h2	HSV1	ccugagccagggacgagugcgacu	24	67			Solexa(NGS), RT-PCR	Expt. Pred.	20181707, 18596690
VMR_0303	hsv1-miR-h2-3p	HSV1	ccugagccagggacgagugcgacu	24	67			Northern blot analysis,RT-PCR	Expt. Pred.	18596690
VMR_0304	hsv1-miR-h27	HSV1	cagaccccuuucuccccccucuu	23	61			Northern blot analysis, RT-PCR	Expt. Pred.	23512275
VMR_0305	hsv1-miR-h3	HSV1	cugggacugugcgguugggac	21	67			Solexa(NGS), RT-PCR	Expt. Pred.	20181707, 19656888, 18596690
VMR_0312	hsv1-miR-h6	HSV1	cacuucccguccuuccauccc	21	62			Northern blot analysis,RT-PCR	Expt. Pred.	18596690
VMR_0316	hsv1-miR-h7*	HSV1	uuuggaucccgaccccucuuc	21	57			Solexa(NGS)	Expt. Pred.	20181707, 19656888
VMR_0318	hsv1-miR-h8*	HSV1	gcccccggucccuguauaua	20	60			Solexa(NGS)	Expt. Pred.	20181707, 19656888
VMR_0273	hsv1-miR-107631	HSV1	gccaucgccuuccuuccaaa	20	55			Northern blot analysis	Expt. Pred.	22661375
VMR_0277	hsv1-miR-132792	HSV1	agucugaggucgaauccgagac	22	55			Northern blot analysis	Expt. Pred.	22661375
VMR_0280	hsv1-miR-38539	HSV1	acgccgcgcaccgcguguug	20	75			Northern blot analysis	Expt. Pred.	22661375
VMR_0282	hsv1-miR-425	HSV1	uagcaguuagacaggcaag	19	47			Northern blot analysis	Expt. Pred.	22661375
VMR_0290	hsv1-miR-h1	HSV1	gauggaaggacgggaagugga	21	57			Northern blot analysis, Solexa(NGS)	Expt. Pred.	16699030, 20181707
VMR_0296	hsv1-miR-h14-5p	HSV1	agucgcacucgucccuggcucagg	24	67			Solexa(NGS)	Expt. Pred.	20181707
VMR_0298	hsv1-miR-h16	HSV1	ccaggaggcugggaucgaaggc	22	68			Solexa(NGS)	Expt. Pred.	20181707
VMR_0300	hsv1-miR-h18	HSV1	cccgcccgccggacgccgggacc	23	91			Solexa(NGS)	Expt. Pred.	20181707
VMR_0302	hsv1-miR-h2*	HSV1	ucgcacgcgcccggcacagacu	22	73			Solexa(NGS), RT-PCR	Expt. Pred.	20181707, 18596690
VMR_0306	hsv1-miR-h3*	HSV1	cuccugaccgcggguuccgagu	22	68			Solexa(NGS)	Expt. Pred.	20181707
VMR_0307	hsv1-miR-h4	HSV1	gguagaguuugacaggcaagca	22	50			RT-PCR,Western blot analysis	Expt. Pred.	23536669
VMR_0311	hsv1-miR-h5-5p	HSV1	ggggggguucgggcaucucuac	22	68			Solexa(NGS)	Expt. Pred.	20181707
VMR_0314	hsv1-miR-h6-5p	HSV1	gguggaaggcaggggggugua	21	67			Solexa(NGS)	Expt. Pred.	20181707
VMR_0315	hsv1-miR-h7	HSV1	aaaggggucugcaaccaaagg	21	52			Solexa(NGS)	Expt. Pred.	20181707, 19656888
VMR_0317	hsv1-miR-h8	HSV1	uauauagggucaggggguuc	20	50			Solexa(NGS)	Expt. Pred.	20181707, 19656888
VMR_0271	hsv1-miR-105617b	HSV1	ucagcgcgccaacgaguugg	20	65			Northern blot analysis	Expt. Pred.	22661375
VMR_0272	hsv1-miR-106947b	HSV1	gggcgggccuguuguuugucuu	22	59			Northern blot analysis	Expt. Pred.	22661375
VMR_0274	hsv1-miR-107969	HSV1	ucacgggaccaaagcgcuucg	21	62			Northern blot analysis	Expt. Pred.	22661375
VMR_0275	hsv1-miR-114783	HSV1	cgaggcgcuggccuccgccgac	22	82			Northern blot analysis	Expt. Pred.	22661375
VMR_0276	hsv1-miR-132144	HSV1	aacgacgggagcggcugcgg	20	75			Northern blot analysis	Expt. Pred.	22661375
VMR_0278	hsv1-miR-2932	HSV1	uuugguugcagaccccuuucuc	22	50			Northern blot analysis	Expt. Pred.	22661375
VMR_0279	hsv1-miR-34208b	HSV1	aagugcuccagggcgaagau	20	55			Northern blot analysis	Expt. Pred.	22661375
VMR_0281	hsv1-miR-40262b	HSV1	guuuccggagcuggccuac	19	63			Northern blot analysis	Expt. Pred.	22661375
VMR_0283	hsv1-miR-470	HSV1	cuugccugucaaacucuaccacc	23	52			Northern blot analysis	Expt. Pred.	22661375
VMR_0284	hsv1-miR-47858b	HSV1	gcgucaacagcgugccgcaga	21	67			Northern blot analysis	Expt. Pred.	22661375
VMR_0285	hsv1-miR-55593	HSV1	guucaccaagcugcugcuga	20	55			Northern blot analysis	Expt. Pred.	22661375
VMR_0286	hsv1-miR-56054b	HSV1	ugccucggucuaccggugc	19	68			Northern blot analysis	Expt. Pred.	22661375
VMR_0287	hsv1-miR-59899	HSV1	caccggcgugucggugcug	20	70			Northern blot analysis	Expt. Pred.	22661375
VMR_0288	hsv1-miR-69853	HSV1	acgacugggccgaggucccg	20	75			Northern blot analysis	Expt. Pred.	22661375
VMR_0308	hsv1-miR-h4-3p	HSV1	cuugccugucuaacucgcuagu	22	50			Solexa(NGS), RT-PCR	Expt. Pred.	20181707, 18596690
VMR_0309	hsv1-miR-h4-5p	HSV1	gguagaguuugacaggcaagca	22	50			Solexa(NGS), RT-PCR	Expt. Pred.	20181707, 18596690
VMR_0310	hsv1-miR-h5-3p	HSV1	gucagagauccaaacccuccgg	22	59			Solexa(NGS), RT-PCR	Expt. Pred.	20181707, 18596690
VMR_0313	hsv1-miR-h6-3p	HSV1	cacuucccguccuuccauccc	21	62			Solexa(NGS), RT-PCR	Expt. Pred.	20181707, 18596690