VIRmiRNA | Resource for experimental viral miRNA and their targets

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VMR_ID	miRNA	Virus	miRNA_Seq	Length	GC	Experimental Method	Target (if any)	PMID

VMR_1065	rlcv-miR-rl1-9	RLCV	ucgaugcaugguccccccuuagu	23	57	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1064	rlcv-miR-rl1-8-5p	RLCV	uaaggugaauauagcugcccauug	24	42	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1063	rlcv-miR-rl1-8-3p	RLCV	ggugggccgcaguucaccuac	21	67	Northern blot analysis	Expt. Pred.	20219930
VMR_1062	rlcv-miR-rl1-8-3p	RLCV	ggugggccgcaguucaccuaca	22	64	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1061	rlcv-miR-rl1-7-5p	RLCV	cgagguaaacaucggcuuacu	21	48	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1060	rlcv-miR-rl1-7-3p	RLCV	agugggccuguuucccucac	20	60	Northern blot analysis	Expt. Pred.	20219930
VMR_1059	rlcv-miR-rl1-7-3p	RLCV	agugggccuguuucccucaca	21	57	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1058	rlcv-miR-rl1-6-5p	RLCV	uuuuaguggaagugacgugcugu	23	43	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1057	rlcv-miR-rl1-6-3p	RLCV	uagcaccgcuauccacuauguc	22	50	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1056	rlcv-miR-rl1-5-5p	RLCV	aaccuagugccggugaugugcu	22	55	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1055	rlcv-miR-rl1-5-3p	RLCV	cgcaccacuuuucacuaggugu	22	50	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1054	rlcv-miR-rl1-4-5p	RLCV	accuaguaauugugcgguguu	21	43	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1053	rlcv-miR-rl1-4-3p	RLCV	caccacacgauccacuaggucu	22	55	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1052	rlcv-miR-rl1-35-5p	RLCV	caccggcucacagcuaguacg	21	62	Northern blot analysis	Expt. Pred.	20219930
VMR_1051	rlcv-miR-rl1-35-5p	RLCV	caccggcucacagcuaguacgg	22	64	Northern blot analysis	Expt. Pred.	20219930
VMR_1050	rlcv-miR-rl1-35-5p	RLCV	caccggcucacagcuaguacgg	22	64	Northern blot analysis	Expt. Pred.	20219930
VMR_1049	rlcv-miR-rl1-35-3p	RLCV	uguaacuugucgugggacg	19	53	Northern blot analysis	Expt. Pred.	20219930
VMR_1048	rlcv-miR-rl1-35-3p	RLCV	guaacuugucgugggacggg	20	60	Northern blot analysis	Expt. Pred.	20219930
VMR_1047	rlcv-miR-rl1-35-3p	RLCV	uguaacuugucgugggacgg	20	55	Northern blot analysis	Expt. Pred.	20219930
VMR_1046	rlcv-miR-rl1-35-3p	RLCV	uguaacuugucgugggacggg	21	57	Northern blot analysis	Expt. Pred.	20219930
VMR_1045	rlcv-miR-rl1-35-3p	RLCV	guaacuugucgugggacgggca	22	59	Northern blot analysis	Expt. Pred.	20219930
VMR_1044	rlcv-miR-rl1-35-3p	RLCV	uguaacuugucgugggacgggc	22	59	Northern blot analysis	Expt. Pred.	20219930
VMR_1043	rlcv-miR-rl1-35-3p	RLCV	uguaacuugucgugggacgggca	23	57	Northern blot analysis	Expt. Pred.	20219930
VMR_1042	rlcv-miR-rl1-35-3p	RLCV	uguaacuugucgugggacgggcau	24	54	Northern blot analysis	Expt. Pred.	20219930
VMR_1041	rlcv-miR-rl1-34-5p	RLCV	uagauggcguaacaggcaacu	21	48	Northern blot analysis	Expt. Pred.	20219930
VMR_1040	rlcv-miR-rl1-34-5p	RLCV	uagauggcguaacaggcaacuu	22	45	Northern blot analysis	Expt. Pred.	20219930
VMR_1039	rlcv-miR-rl1-34-3p	RLCV	uuagcccgaaccgcuauccau	21	52	Northern blot analysis	Expt. Pred.	20219930
VMR_1038	rlcv-miR-rl1-34-3p	RLCV	uuagcccgaaccgcuauccaua	22	50	Northern blot analysis	Expt. Pred.	20219930
VMR_1037	rlcv-miR-rl1-34-3p	RLCV	uuagcccgaaccgcuauccaua	22	50	Northern blot analysis	Expt. Pred.	20219930
VMR_1036	rlcv-miR-rl1-34-3p	RLCV	guuagcccgaaccgcuauccaua	23	52	Northern blot analysis	Expt. Pred.	20219930
VMR_1035	rlcv-miR-rl1-33-5p	RLCV	cauugucuucauuugcccuugc	22	45	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1034	rlcv-miR-rl1-33-3p	RLCV	aaagagcaaauggggggaauag	22	45	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1033	rlcv-miR-rl1-33-3p	RLCV	aaagagcaaauggggggaauagc	23	48	Northern blot analysis	Expt. Pred.	20219930
VMR_1032	rlcv-miR-rl1-32-5p	RLCV	uaacuuacuacugccgcuuuaca	23	39	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1031	rlcv-miR-rl1-32-3p	RLCV	uaaaugcgagcaguaguaggcg	22	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1030	rlcv-miR-rl1-31-5p	RLCV	ucgcuuacgccgaccgcguaac	22	64	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1029	rlcv-miR-rl1-31-3p	RLCV	uaggcgugucgucguaagcagc	22	59	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1028	rlcv-miR-rl1-30-5p	RLCV	accgguccuuugagguacgaaa	22	50	Northern blot analysis	Expt. Pred.	20219930
VMR_1027	rlcv-miR-rl1-30-5p	RLCV	accgguccuuugagguacgaaac	23	52	Northern blot analysis	Expt. Pred.	20219930
VMR_1026	rlcv-miR-rl1-30-5p	RLCV	accgguccuuugagguacgaaaca	24	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1025	rlcv-miR-rl1-30-3p	RLCV	uuucguuuucgaaggucggcug	22	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1024	rlcv-miR-rl1-3	RLCV	ucgcaccucgccgucucuacugcu	24	63	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1023	rlcv-miR-rl1-29-5p	RLCV	ccagucccagcagacaaaac	20	55	Northern blot analysis	Expt. Pred.	20219930
VMR_1022	rlcv-miR-rl1-29-5p	RLCV	ccagucccagcagacaaaaca	21	52	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1021	rlcv-miR-rl1-29-3p	RLCV	uuuuguuugcuugggacugcag	22	45	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1020	rlcv-miR-rl1-28-5p	RLCV	uggaaggcguugcuuucag	19	53	Northern blot analysis	Expt. Pred.	20219930
VMR_1019	rlcv-miR-rl1-28-5p	RLCV	uggaaggcguugcuuucagcug	22	55	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1018	rlcv-miR-rl1-28-3p	RLCV	gaggaaaguaucgccuucuaga	22	45	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1017	rlcv-miR-rl1-27-5p	RLCV	gccgccuccuugguucuguc	20	65	Northern blot analysis	Expt. Pred.	20219930
VMR_1016	rlcv-miR-rl1-27-5p	RLCV	gccgccuccuugguucugucc	21	67	Northern blot analysis	Expt. Pred.	20219930
VMR_1015	rlcv-miR-rl1-27-5p	RLCV	gccgccuccuugguucugucca	22	64	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1014	rlcv-miR-rl1-27-3p	RLCV	cacauaaccauggaggugguug	22	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1013	rlcv-miR-rl1-26-5p	RLCV	gcuacacccgggauucgaagc	21	62	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1012	rlcv-miR-rl1-26-3p	RLCV	uacgauucuccggguuuagcag	22	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1011	rlcv-miR-rl1-2-5p	RLCV	aaauucugccacagaagauag	21	38	Northern blot analysis	Expt. Pred.	20219930
VMR_1010	rlcv-miR-rl1-2-5p	RLCV	aaauucugccacagaagauagc	22	41	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_1009	rlcv-miR-rl1-25-5p	RLCV	ugcuagacccuaaauuggaa	20	40	Northern blot analysis	Expt. Pred.	20219930
VMR_1008	rlcv-miR-rl1-25-5p	RLCV	ugcuagacccuaaauuggaaa	21	38	Northern blot analysis	Expt. Pred.	20219930
VMR_1007	rlcv-miR-rl1-25-5p	RLCV	ugcuagacccuaaauuggaaac	22	41	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1006	rlcv-miR-rl1-25-3p	RLCV	ugacaauuuaaugggucuagua	22	32	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1005	rlcv-miR-rl1-24-5p	RLCV	cucaaguucucauuuccaauaca	23	35	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1004	rlcv-miR-rl1-24-3p	RLCV	uaucggagauaggacuugauac	22	41	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_1003	rlcv-miR-rl1-2-3p	RLCV	uaucuuuugcgggggaauuu	20	40	Northern blot analysis	Expt. Pred.	20219930
VMR_1002	rlcv-miR-rl1-2-3p	RLCV	uaucuuuugcgggggaauuuc	21	43	Northern blot analysis	Expt. Pred.	20219930
VMR_1001	rlcv-miR-rl1-2-3p	RLCV	uaucuuuugcgggggaauuucc	22	45	Northern blot analysis	Expt. Pred.	20219930
VMR_1000	rlcv-miR-rl1-2-3p	RLCV	uaucuuuugcgggggaauuucca	23	43	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0999	rlcv-miR-rl1-23-5p	RLCV	ucacuagugcuggcaccuaaga	22	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0998	rlcv-miR-rl1-23-3p	RLCV	uuaguugucugcacuggagagu	22	45	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0997	rlcv-miR-rl1-22-5p	RLCV	cguggggggaaacggugga	19	68	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0996	rlcv-miR-rl1-22-5p	RLCV	ucguggggggaaacggugga	20	65	Northern blot analysis	Expt. Pred.	20219930
VMR_0995	rlcv-miR-rl1-22-5p	RLCV	cguggggggaaacgguggau	20	65	Northern blot analysis	Expt. Pred.	20219930
VMR_0994	rlcv-miR-rl1-22-5p	RLCV	ucguggggggaaacgguggau	21	62	Northern blot analysis	Expt. Pred.	20219930
VMR_0993	rlcv-miR-rl1-22-3p	RLCV	ucaccguuucauccccacgauu	22	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0992	rlcv-miR-rl1-21-5p	RLCV	uugauuguggggggagggcu	20	60	Northern blot analysis	Expt. Pred.	20219930
VMR_0991	rlcv-miR-rl1-21-5p	RLCV	uugauuguggggggagggcucu	22	59	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0990	rlcv-miR-rl1-21-3p	RLCV	aggccucuucucacaauucuaa	22	41	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0989	rlcv-miR-rl1-20-5p	RLCV	uaaaggguagugugguucacagc	23	48	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0988	rlcv-miR-rl1-20-3p	RLCV	uguggaucuaacuucccuuagu	22	41	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0987	rlcv-miR-rl1-19-5p	RLCV	uauagauagcguggguguguga	22	45	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0986	rlcv-miR-rl1-19-3p	RLCV	aucaccacccccugucugcu	20	60	Northern blot analysis	Expt. Pred.	20219930
VMR_0985	rlcv-miR-rl1-19-3p	RLCV	aucaccacccccugucugcuu	21	57	Northern blot analysis	Expt. Pred.	20219930
VMR_0984	rlcv-miR-rl1-19-3p	RLCV	gaucaccacccccugucugcu	21	62	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0983	rlcv-miR-rl1-19-3p	RLCV	gaucaccacccccugucugcuu	22	59	Northern blot analysis	Expt. Pred.	20219930
VMR_0982	rlcv-miR-rl1-18-5p	RLCV	uagaugauugggggcggcguau	22	55	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0981	rlcv-miR-rl1-18-5p	RLCV	uagaugauugggggcggcguauc	23	57	Northern blot analysis	Expt. Pred.	20219930
VMR_0980	rlcv-miR-rl1-18-5p	RLCV	uagaugauugggggcggcguaucu	24	54	Northern blot analysis	Expt. Pred.	20219930
VMR_0979	rlcv-miR-rl1-18-3p	RLCV	uuagccccuccccaucaucuug	22	55	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0978	rlcv-miR-rl1-17-5p	RLCV	ugauggacagcggggaagugca	22	59	Northern blot analysis	Expt. Pred.	20219930
VMR_0977	rlcv-miR-rl1-17-5p	RLCV	ugauggacagcggggaagugcacu	24	58	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0976	rlcv-miR-rl1-17-3p	RLCV	ugcuucgcccucuccaucauaa	22	50	Northern blot analysis, Solexa(NGS)	Expt. Pred.	19889779, 20219930
VMR_0975	rlcv-miR-rl1-16-5p	RLCV	aagcaggcaugucuucauucc	21	48	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0974	rlcv-miR-rl1-16-3p	RLCV	caugaaacacauggccuguucc	22	50	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0973	rlcv-miR-rl1-1-5p	RLCV	uaaccugaucagccccgggguu	22	59	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0972	rlcv-miR-rl1-15-5p	RLCV	acccacccuucucgacggg	19	68	Northern blot analysis	Expt. Pred.	20219930
VMR_0971	rlcv-miR-rl1-15-5p	RLCV	acccacccuucucgacggggca	22	68	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0970	rlcv-miR-rl1-15-3p	RLCV	uccuguagaguaugggugugguuu	24	46	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0969	rlcv-miR-rl1-14-3p	RLCV	ucgcacaucaggcugaacgac	21	57	Cloned, Northern blot analysis, RT-PCR	Expt. Pred.	16557291, 20219930, 19889779
VMR_0968	rlcv-miR-rl1-1-3p	RLCV	cuccgggccugaagagguug	20	65	Northern blot analysis	Expt. Pred.	20219930
VMR_0967	rlcv-miR-rl1-1-3p	RLCV	cuccgggccugaagagguuga	21	62	Northern blot analysis	Expt. Pred.	20219930
VMR_0966	rlcv-miR-rl1-1-3p	RLCV	cuccgggccugaagagguugac	22	64	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0965	rlcv-miR-rl1-13-5p	RLCV	ccugggcaugggcuaugaa	19	58	Northern blot analysis	Expt. Pred.	20219930
VMR_0964	rlcv-miR-rl1-13-5p	RLCV	ccugggcaugggcuaugaaa	20	55	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0963	rlcv-miR-rl1-13-3p	RLCV	gaucauagccaguguccaggga	22	55	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0962	rlcv-miR-rl1-12-5p	RLCV	agaccagaccaugcacaguggg	22	59	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0961	rlcv-miR-rl1-12-3p	RLCV	aacggugcauggacuggcuaga	22	55	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0960	rlcv-miR-rl1-11-5p	RLCV	ccguauccuaucaagugugacg	22	50	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0959	rlcv-miR-rl1-11-3p	RLCV	ugacacucgauaggauacgggg	22	55	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0958	rlcv-miR-rl1-10-5p	RLCV	aucggguuuccgcuguacuug	21	52	Northern blot analysis	Expt. Pred.	20219930
VMR_0957	rlcv-miR-rl1-10-5p	RLCV	aucggguuuccgcuguacuugc	22	55	Northern blot analysis	Expt. Pred.	20219930
VMR_0956	rlcv-miR-rl1-10-5p	RLCV	aucggguuuccgcuguacuugca	23	52	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930
VMR_0955	rlcv-miR-rl1-10-3p	RLCV	uagugcgccggugaccugauag	22	59	Cloned, Solexa(NGS)	Expt. Pred.	16557291, 20219930

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